| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is yejH [C]
Identifier: 126695392
GI number: 126695392
Start: 59311
End: 62076
Strand: Reverse
Name: yejH [C]
Synonym: P9301_00541
Alternate gene names: 126695392
Gene position: 62076-59311 (Counterclockwise)
Preceding gene: 126695393
Following gene: 126695390
Centisome position: 3.78
GC content: 29.54
Gene sequence:
>2766_bases ATGGCAACCTTTGATGAATTCTTTTCATCTTTAGATTTAGATGAAGAAGGCAATATAAAACACAATAAAACAGAGAAAGG TCGCCCTTTTGAACAAATATTTGTCAAATGGTTTCTACTCAATGATCCTATTTGGAGTTCTATTGTTGATCAATTTCTTA AAACAGATAAAAAAGATCTAGGTGTAGATTTAATTTTTAAAGATAAAGAAGGTAATAAATGGGCAGTTCAATCAAAAGGT TATTCACCTCAAACATCAATTACAAAAGAATCAATTGATAGTTTTATATCTGCTTCTCCAACTACAAAATTTCACAGGAG ACTTTTAATTGCAAGCACCAATCGTATTGGATCAAATGCAGAAATAACACTAAAAGAAAATAAAGTTATCAAATTTCTAT TAAAAGATTTTCGAAAAGCAAATATTAAATTCCCATCTTCTATTAAAAATTTATCTTCTGGGAAAAAGAAAGATCCTTTT ACGCCAAAACTTCATCAAAGAAAAGCAATAAATGATGTTTTAAATAAAATCGACAACATTAGTAGAGGCCAGATAATAAT GGCATGCGGAACAGGAAAAACATTAACTTCTTTGTGGATTAAGGAAGAGTTAAAATTGAAACAAACTTTAGTCTTACTTC CCTCTTTAAATCTCCTGAGTCAAACTTTATCATCATGGAGAAATAATGCCAAATTCAATTTTGATTGGTTATGTGTTTGC TCTGATCACACAGTTCATAAGAAAAATAATGGAGAAGATGAGTGGATAAATGATCCCTCTGAATTAGGGATACCTGTAAC AAGTAACGTCGAAGAAATTCAAAATTTCCTCCTTAAGGAAAAATCCAAAGTTTTATTTTCTACTTATCAATCATCACTGT TAGTAGTTGAAGCGCAAAAAAACATCAATATTCCTAATTTTGATATGGTCTTTGCTGATGAAGCACACAAATGCGCAGGT AAAGTATCAAGTGAATTTAGTGCCGTATTAGACGAAGCAAAAATTAGAACCTCGAAGAGGTTATTCTTTACAGCAACTCC AAAAGTTTTAACTAATCAAATTAAAAAACAAGCAACAAAAAGTGAAATAGAAGTCGCATCTATGGATGACGAAAAATTAT TTGGAGAAGTAATTCATACTTTTAAGTTTTCAGATGCCATCGAACAAAAAATTCTCTCTGATTATGAATTAATTGTTGTT GGAGTAGATGATCAAATGGTTACAGAACAAATTAAAAATAGGGATTTTATTAAAACCTCAGAAGAAAATATATTAGATGC AGAAACTCTTGCTCTACAAATTGCTCTTGCAAAAGGAATCAAACAAAATAATTTGAGTAGAATTATTAATTTCCATACTC GTATTTCAGGAGCAAAATTATTTAAAGATACATTTAAAAAAGTTATTAATTTAATCCCTGAGAAAGATAAACCAATAGGT AAAATTAGTTGCGATTATGTTGAAGGTAAAATGAGTACGGAGGATCGTAACTCCAAAATTCAAGACCTTGAAAATTTAGA AAATGGTGAAATTAAAATACTTGGAAATGCAAGATGTTTATCTGAAGGAGTTGATGTTCCATCATTAGATGGCATTACTT TTGTAGATCCAAAAAGTAGTGAGATTGATATTGTTCAAGCAGTCGGCAGAGTTTTAAGAAAAGGTAATAATAAAAAAGGA ACTATATTGATTCCTGTCTATCTCAAAGATTTAAATAATGTAGATAATGAAGTTTTAGCAGGAAGATTTAGTGATGTATG GCGAGTGATACGAGCACTAAAGTGTCATGATGATGTTCTTAAAGAAAGTATTGATAATCTAAGAATTTCATTCGGTAAAA GAAGAGTAAGAAGAGAGGGTTATAAGGGGATTCAAAAGGTTCATTTTGATTTGCCAGTTGCTAATTTAAGTAAAGAGTTT GTAGATTCGATCAATGTACTTTTGGTCAAAAATACATCAGAATCATGGTATGAAATATATGGAAAACTTCTTGAATTTAA AGAAAAACACGGTAATACATTAGTTCATAGAAATGAACCAGATATTGGAAGATGGGTGGAGATTCAGAGAAGGTTATATA AAAAAAATAAACTCGCTAAGGAAAAAATAGATCTTCTGGATCAAATTGGATTCTCTTGGGATGCATCAGATAAAACATGG AATAAAAGAATTGACGAATTCAAGGAATTAAGAAAAATATATGGGGGGACTCAAAATATTCCTAGTTACGGTAAAGGTTC AAAATATTATCAGTTATATAAGTGGTTTGGCACAATCAGAAAAAGGTTTGAAAATAAAAGATTAACTAAAGAAAAAATTC AACAATTAAAAGACTTAGACTTTGTTTTTGATACCAAACGAAAAAAAGATGAAGAATGGCTTCAAGTTTATAAAAAGTAT TTAGATTTCAAACGCAAAAATAAGAAAGAACCAACGGATTCTACGGATAAGATTTTAAGTGAGTGGAGAAGTACTCAAAT AAAACGAAATAAGAAGAAAGGAGGAATTACTCAATGGAGATTAAATTTGTTAGAAGAAGCAAACTTCACTTGGTCAAAAG AAGATATTTGGTTAAATAAACTAAAAAACACTGAAAAATATATAGAAAAATTTGGTAGTCTTAAGAATGCTAAACAAAAA AATGAACAAGTCAGAGGTTGGATTCAATATCAAAAAATTGCTTATAAAAACGGAAAACTCTCAAAAGAAAAATTAGATTT ACTAAATAAACTCGACAGTGAGTGGAGCAAATTTCAAGATTATTAA
Upstream 100 bases:
>100_bases ACAAGCAAAAATAAACGGTTATAAAGCAAATAACTTTAGGGACAAATTAACTCTTATGATTATTACTAATCCGATGTGCT TTGTCTTTTGATCCCGCAAG
Downstream 100 bases:
>100_bases TATACAACCACTTTAACTCTATTATTAATTTTTGTAGAAAGATTATTAAACCTCATATATTGCGATTCAAATGATAATTG TACTTTTCCAGAACGTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: Helicase/Methyltransferase; Type III Restriction Protein Res Subunit; Type III Restriction Res Subunit; Helicase Domain Protein; Helicase Domain-Containing Protein; Adenine Specific DNA Methyltransferase; Superfamily II DNA/RNA Helicase; LOW QUALITY PROTEIN Helicase; Helicase Associated Domain Protein; Helicase-Like Protein; Endonuclease And Methylase LlaGI; Type III Restriction Res Subunit Family; DNA Helicase Restriction Type III R Subunit; DEAD/DEAH Box Helicase-Like; II DNA/RNA Helicase; Restriction- System LlaBIII; Restriction/
Number of amino acids: Translated: 921; Mature: 920
Protein sequence:
>921_residues MATFDEFFSSLDLDEEGNIKHNKTEKGRPFEQIFVKWFLLNDPIWSSIVDQFLKTDKKDLGVDLIFKDKEGNKWAVQSKG YSPQTSITKESIDSFISASPTTKFHRRLLIASTNRIGSNAEITLKENKVIKFLLKDFRKANIKFPSSIKNLSSGKKKDPF TPKLHQRKAINDVLNKIDNISRGQIIMACGTGKTLTSLWIKEELKLKQTLVLLPSLNLLSQTLSSWRNNAKFNFDWLCVC SDHTVHKKNNGEDEWINDPSELGIPVTSNVEEIQNFLLKEKSKVLFSTYQSSLLVVEAQKNINIPNFDMVFADEAHKCAG KVSSEFSAVLDEAKIRTSKRLFFTATPKVLTNQIKKQATKSEIEVASMDDEKLFGEVIHTFKFSDAIEQKILSDYELIVV GVDDQMVTEQIKNRDFIKTSEENILDAETLALQIALAKGIKQNNLSRIINFHTRISGAKLFKDTFKKVINLIPEKDKPIG KISCDYVEGKMSTEDRNSKIQDLENLENGEIKILGNARCLSEGVDVPSLDGITFVDPKSSEIDIVQAVGRVLRKGNNKKG TILIPVYLKDLNNVDNEVLAGRFSDVWRVIRALKCHDDVLKESIDNLRISFGKRRVRREGYKGIQKVHFDLPVANLSKEF VDSINVLLVKNTSESWYEIYGKLLEFKEKHGNTLVHRNEPDIGRWVEIQRRLYKKNKLAKEKIDLLDQIGFSWDASDKTW NKRIDEFKELRKIYGGTQNIPSYGKGSKYYQLYKWFGTIRKRFENKRLTKEKIQQLKDLDFVFDTKRKKDEEWLQVYKKY LDFKRKNKKEPTDSTDKILSEWRSTQIKRNKKKGGITQWRLNLLEEANFTWSKEDIWLNKLKNTEKYIEKFGSLKNAKQK NEQVRGWIQYQKIAYKNGKLSKEKLDLLNKLDSEWSKFQDY
Sequences:
>Translated_921_residues MATFDEFFSSLDLDEEGNIKHNKTEKGRPFEQIFVKWFLLNDPIWSSIVDQFLKTDKKDLGVDLIFKDKEGNKWAVQSKG YSPQTSITKESIDSFISASPTTKFHRRLLIASTNRIGSNAEITLKENKVIKFLLKDFRKANIKFPSSIKNLSSGKKKDPF TPKLHQRKAINDVLNKIDNISRGQIIMACGTGKTLTSLWIKEELKLKQTLVLLPSLNLLSQTLSSWRNNAKFNFDWLCVC SDHTVHKKNNGEDEWINDPSELGIPVTSNVEEIQNFLLKEKSKVLFSTYQSSLLVVEAQKNINIPNFDMVFADEAHKCAG KVSSEFSAVLDEAKIRTSKRLFFTATPKVLTNQIKKQATKSEIEVASMDDEKLFGEVIHTFKFSDAIEQKILSDYELIVV GVDDQMVTEQIKNRDFIKTSEENILDAETLALQIALAKGIKQNNLSRIINFHTRISGAKLFKDTFKKVINLIPEKDKPIG KISCDYVEGKMSTEDRNSKIQDLENLENGEIKILGNARCLSEGVDVPSLDGITFVDPKSSEIDIVQAVGRVLRKGNNKKG TILIPVYLKDLNNVDNEVLAGRFSDVWRVIRALKCHDDVLKESIDNLRISFGKRRVRREGYKGIQKVHFDLPVANLSKEF VDSINVLLVKNTSESWYEIYGKLLEFKEKHGNTLVHRNEPDIGRWVEIQRRLYKKNKLAKEKIDLLDQIGFSWDASDKTW NKRIDEFKELRKIYGGTQNIPSYGKGSKYYQLYKWFGTIRKRFENKRLTKEKIQQLKDLDFVFDTKRKKDEEWLQVYKKY LDFKRKNKKEPTDSTDKILSEWRSTQIKRNKKKGGITQWRLNLLEEANFTWSKEDIWLNKLKNTEKYIEKFGSLKNAKQK NEQVRGWIQYQKIAYKNGKLSKEKLDLLNKLDSEWSKFQDY >Mature_920_residues ATFDEFFSSLDLDEEGNIKHNKTEKGRPFEQIFVKWFLLNDPIWSSIVDQFLKTDKKDLGVDLIFKDKEGNKWAVQSKGY SPQTSITKESIDSFISASPTTKFHRRLLIASTNRIGSNAEITLKENKVIKFLLKDFRKANIKFPSSIKNLSSGKKKDPFT PKLHQRKAINDVLNKIDNISRGQIIMACGTGKTLTSLWIKEELKLKQTLVLLPSLNLLSQTLSSWRNNAKFNFDWLCVCS DHTVHKKNNGEDEWINDPSELGIPVTSNVEEIQNFLLKEKSKVLFSTYQSSLLVVEAQKNINIPNFDMVFADEAHKCAGK VSSEFSAVLDEAKIRTSKRLFFTATPKVLTNQIKKQATKSEIEVASMDDEKLFGEVIHTFKFSDAIEQKILSDYELIVVG VDDQMVTEQIKNRDFIKTSEENILDAETLALQIALAKGIKQNNLSRIINFHTRISGAKLFKDTFKKVINLIPEKDKPIGK ISCDYVEGKMSTEDRNSKIQDLENLENGEIKILGNARCLSEGVDVPSLDGITFVDPKSSEIDIVQAVGRVLRKGNNKKGT ILIPVYLKDLNNVDNEVLAGRFSDVWRVIRALKCHDDVLKESIDNLRISFGKRRVRREGYKGIQKVHFDLPVANLSKEFV DSINVLLVKNTSESWYEIYGKLLEFKEKHGNTLVHRNEPDIGRWVEIQRRLYKKNKLAKEKIDLLDQIGFSWDASDKTWN KRIDEFKELRKIYGGTQNIPSYGKGSKYYQLYKWFGTIRKRFENKRLTKEKIQQLKDLDFVFDTKRKKDEEWLQVYKKYL DFKRKNKKEPTDSTDKILSEWRSTQIKRNKKKGGITQWRLNLLEEANFTWSKEDIWLNKLKNTEKYIEKFGSLKNAKQKN EQVRGWIQYQKIAYKNGKLSKEKLDLLNKLDSEWSKFQDY
Specific function: Unknown
COG id: COG4889
COG function: function code R; Predicted helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106701; Mature: 106569
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFDEFFSSLDLDEEGNIKHNKTEKGRPFEQIFVKWFLLNDPIWSSIVDQFLKTDKKDL CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHC GVDLIFKDKEGNKWAVQSKGYSPQTSITKESIDSFISASPTTKFHRRLLIASTNRIGSNA CEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHEEHEEECCCCCCCC EITLKENKVIKFLLKDFRKANIKFPSSIKNLSSGKKKDPFTPKLHQRKAINDVLNKIDNI EEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC SRGQIIMACGTGKTLTSLWIKEELKLKQTLVLLPSLNLLSQTLSSWRNNAKFNFDWLCVC CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEE SDHTVHKKNNGEDEWINDPSELGIPVTSNVEEIQNFLLKEKSKVLFSTYQSSLLVVEAQK CCCCEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC NINIPNFDMVFADEAHKCAGKVSSEFSAVLDEAKIRTSKRLFFTATPKVLTNQIKKQATK CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHH SEIEVASMDDEKLFGEVIHTFKFSDAIEQKILSDYELIVVGVDDQMVTEQIKNRDFIKTS HHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCC EENILDAETLALQIALAKGIKQNNLSRIINFHTRISGAKLFKDTFKKVINLIPEKDKPIG CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCC KISCDYVEGKMSTEDRNSKIQDLENLENGEIKILGNARCLSEGVDVPSLDGITFVDPKSS CEEEHEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCHHHHCCCCCCCCCCEEEECCCCC EIDIVQAVGRVLRKGNNKKGTILIPVYLKDLNNVDNEVLAGRFSDVWRVIRALKCHDDVL CHHHHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KESIDNLRISFGKRRVRREGYKGIQKVHFDLPVANLSKEFVDSINVLLVKNTSESWYEIY HHHHHHHHHHHHHHHHHHHHHHHHHHHECCCCHHHHHHHHHCCCEEEEEECCCHHHHHHH GKLLEFKEKHGNTLVHRNEPDIGRWVEIQRRLYKKNKLAKEKIDLLDQIGFSWDASDKTW HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH NKRIDEFKELRKIYGGTQNIPSYGKGSKYYQLYKWFGTIRKRFENKRLTKEKIQQLKDLD HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FVFDTKRKKDEEWLQVYKKYLDFKRKNKKEPTDSTDKILSEWRSTQIKRNKKKGGITQWR HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH LNLLEEANFTWSKEDIWLNKLKNTEKYIEKFGSLKNAKQKNEQVRGWIQYQKIAYKNGKL HHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SKEKLDLLNKLDSEWSKFQDY CHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATFDEFFSSLDLDEEGNIKHNKTEKGRPFEQIFVKWFLLNDPIWSSIVDQFLKTDKKDL CCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHC GVDLIFKDKEGNKWAVQSKGYSPQTSITKESIDSFISASPTTKFHRRLLIASTNRIGSNA CEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHEEHEEECCCCCCCC EITLKENKVIKFLLKDFRKANIKFPSSIKNLSSGKKKDPFTPKLHQRKAINDVLNKIDNI EEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC SRGQIIMACGTGKTLTSLWIKEELKLKQTLVLLPSLNLLSQTLSSWRNNAKFNFDWLCVC CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEE SDHTVHKKNNGEDEWINDPSELGIPVTSNVEEIQNFLLKEKSKVLFSTYQSSLLVVEAQK CCCCEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC NINIPNFDMVFADEAHKCAGKVSSEFSAVLDEAKIRTSKRLFFTATPKVLTNQIKKQATK CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHH SEIEVASMDDEKLFGEVIHTFKFSDAIEQKILSDYELIVVGVDDQMVTEQIKNRDFIKTS HHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCC EENILDAETLALQIALAKGIKQNNLSRIINFHTRISGAKLFKDTFKKVINLIPEKDKPIG CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCC KISCDYVEGKMSTEDRNSKIQDLENLENGEIKILGNARCLSEGVDVPSLDGITFVDPKSS CEEEHEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCHHHHCCCCCCCCCCEEEECCCCC EIDIVQAVGRVLRKGNNKKGTILIPVYLKDLNNVDNEVLAGRFSDVWRVIRALKCHDDVL CHHHHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KESIDNLRISFGKRRVRREGYKGIQKVHFDLPVANLSKEFVDSINVLLVKNTSESWYEIY HHHHHHHHHHHHHHHHHHHHHHHHHHHECCCCHHHHHHHHHCCCEEEEEECCCHHHHHHH GKLLEFKEKHGNTLVHRNEPDIGRWVEIQRRLYKKNKLAKEKIDLLDQIGFSWDASDKTW HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH NKRIDEFKELRKIYGGTQNIPSYGKGSKYYQLYKWFGTIRKRFENKRLTKEKIQQLKDLD HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FVFDTKRKKDEEWLQVYKKYLDFKRKNKKEPTDSTDKILSEWRSTQIKRNKKKGGITQWR HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH LNLLEEANFTWSKEDIWLNKLKNTEKYIEKFGSLKNAKQKNEQVRGWIQYQKIAYKNGKL HHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SKEKLDLLNKLDSEWSKFQDY CHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA