Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is malR [H]

Identifier: 126700785

GI number: 126700785

Start: 3699428

End: 3699790

Strand: Direct

Name: malR [H]

Synonym: CD3166

Alternate gene names: 126700785

Gene position: 3699428-3699790 (Clockwise)

Preceding gene: 126700784

Following gene: 126700786

Centisome position: 86.23

GC content: 30.58

Gene sequence:

>363_bases
TTGAAACTTCGTGATGAGTATACTTGCCCATTAGAACTAACACATGATATGATAAAAGGCAAATGGAAATCTATTATATT
ATGGAGATTACGCATAGGACCAACTTCCTTATCAAAACTTGAAAAGGAAATCAATGGTATTAATCAAAAGATGTTACTTG
AACAACTTAAAGAATTAATTGAATTTGGTCTTGTAGATAAAAAGACATATGAAGGTTACCCACTTAAAGTTGAATACTCA
CTTACACCTATTCGAGGGAAACAAATATTGGATGCTTTGGCTATAATGCAAGATATAGGAATTAGCTTTATGTTGGATAA
TGGTATGGAAGATATTCTTAAGGAAAAAGGTGTTTTAAAGTAA

Upstream 100 bases:

>100_bases
AAGAATTAGATTCATGGGATATATCAAATAAAAAAGTTGAGTTTGTATATAAGCTTGCTTCAAAATGTATCTTGGCAAAG
TAAAATGGAGGTGAACTTAT

Downstream 100 bases:

>100_bases
ATAGATACCCACAAAAAAGTAAGTAATTTACCATTATTTTCAACTGGTATATAATTAAATTATAGATATATTCTATTAAT
TTATTATAATAGGAGGTAAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKLRDEYTCPLELTHDMIKGKWKSIILWRLRIGPTSLSKLEKEINGINQKMLLEQLKELIEFGLVDKKTYEGYPLKVEYS
LTPIRGKQILDALAIMQDIGISFMLDNGMEDILKEKGVLK

Sequences:

>Translated_120_residues
MKLRDEYTCPLELTHDMIKGKWKSIILWRLRIGPTSLSKLEKEINGINQKMLLEQLKELIEFGLVDKKTYEGYPLKVEYS
LTPIRGKQILDALAIMQDIGISFMLDNGMEDILKEKGVLK
>Mature_120_residues
MKLRDEYTCPLELTHDMIKGKWKSIILWRLRIGPTSLSKLEKEINGINQKMLLEQLKELIEFGLVDKKTYEGYPLKVEYS
LTPIRGKQILDALAIMQDIGISFMLDNGMEDILKEKGVLK

Specific function: Potential regulator of the malBH genes [H]

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13897; Mature: 13897

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRDEYTCPLELTHDMIKGKWKSIILWRLRIGPTSLSKLEKEINGINQKMLLEQLKELI
CCCCCCCCCCHHHHHHHHHCCHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH
EFGLVDKKTYEGYPLKVEYSLTPIRGKQILDALAIMQDIGISFMLDNGMEDILKEKGVLK
HHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCC
>Mature Secondary Structure
MKLRDEYTCPLELTHDMIKGKWKSIILWRLRIGPTSLSKLEKEINGINQKMLLEQLKELI
CCCCCCCCCCHHHHHHHHHCCHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH
EFGLVDKKTYEGYPLKVEYSLTPIRGKQILDALAIMQDIGISFMLDNGMEDILKEKGVLK
HHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11882720 [H]