Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700784

Identifier: 126700784

GI number: 126700784

Start: 3698796

End: 3699410

Strand: Direct

Name: 126700784

Synonym: CD3165

Alternate gene names: NA

Gene position: 3698796-3699410 (Clockwise)

Preceding gene: 126700778

Following gene: 126700785

Centisome position: 86.21

GC content: 27.97

Gene sequence:

>615_bases
TTGGAAGAAGTAATTGCAAAAATTATTACTATAGAAAATGGATTCAAAGAAATTGAAAACATTGCTAAAAAAATTGTAAA
AAATAATGACTCAAAAAAGTGTTATTATCTATCAATCTACTTATATAGGTCAGAATATTATCAAGTAAGAGAATTGGCTG
TGTTTATACTTGGTTTTATATCAGTAACTATTTCTGAAGCTTTGTTATTTTTAAAAGATAATGTGAGTAAAGATGAAAAC
TGGAGAGTACAAGAAATACTAGCTAAATCATTTGATTATTATTGCAGTGAAGTAGGATATGAAAAGGCTCTTCCTGTTAT
AAAAGAATGGCTTAATTCTGATAGTCCAAACATAAAAAGGGCTGTGACAGAAGGTCTTCGAATTTGGACTAGTAGAGACT
ATTTTAAATCTAATCCTGACGTTGCTATATCACTACTTTCTAGTTTAAAAGAAGATGATAGCGAATACTTGAGAAAGTCT
GTAGGTAATGCTCTTAGAGATATAAGTAAAAAATATCCAGATTTAGTAAAAAAAGAATTAGATTCATGGGATATATCAAA
TAAAAAAGTTGAGTTTGTATATAAGCTTGCTTCAAAATGTATCTTGGCAAAGTAA

Upstream 100 bases:

>100_bases
AACGTTTTTTGACAAGTCTTTATTTTGTCTAAATTAAACAAACTTTTTTACAAATAAATACATAAAATTTAAACTAATCT
ATTTATTGGAGGAGATAAAA

Downstream 100 bases:

>100_bases
AATGGAGGTGAACTTATTTGAAACTTCGTGATGAGTATACTTGCCCATTAGAACTAACACATGATATGATAAAAGGCAAA
TGGAAATCTATTATATTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MEEVIAKIITIENGFKEIENIAKKIVKNNDSKKCYYLSIYLYRSEYYQVRELAVFILGFISVTISEALLFLKDNVSKDEN
WRVQEILAKSFDYYCSEVGYEKALPVIKEWLNSDSPNIKRAVTEGLRIWTSRDYFKSNPDVAISLLSSLKEDDSEYLRKS
VGNALRDISKKYPDLVKKELDSWDISNKKVEFVYKLASKCILAK

Sequences:

>Translated_204_residues
MEEVIAKIITIENGFKEIENIAKKIVKNNDSKKCYYLSIYLYRSEYYQVRELAVFILGFISVTISEALLFLKDNVSKDEN
WRVQEILAKSFDYYCSEVGYEKALPVIKEWLNSDSPNIKRAVTEGLRIWTSRDYFKSNPDVAISLLSSLKEDDSEYLRKS
VGNALRDISKKYPDLVKKELDSWDISNKKVEFVYKLASKCILAK
>Mature_204_residues
MEEVIAKIITIENGFKEIENIAKKIVKNNDSKKCYYLSIYLYRSEYYQVRELAVFILGFISVTISEALLFLKDNVSKDEN
WRVQEILAKSFDYYCSEVGYEKALPVIKEWLNSDSPNIKRAVTEGLRIWTSRDYFKSNPDVAISLLSSLKEDDSEYLRKS
VGNALRDISKKYPDLVKKELDSWDISNKKVEFVYKLASKCILAK

Specific function: Unknown

COG id: COG4335

COG function: function code L; DNA alkylation repair enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23729; Mature: 23729

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEVIAKIITIENGFKEIENIAKKIVKNNDSKKCYYLSIYLYRSEYYQVRELAVFILGFI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHH
SVTISEALLFLKDNVSKDENWRVQEILAKSFDYYCSEVGYEKALPVIKEWLNSDSPNIKR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHH
AVTEGLRIWTSRDYFKSNPDVAISLLSSLKEDDSEYLRKSVGNALRDISKKYPDLVKKEL
HHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSWDISNKKVEFVYKLASKCILAK
HCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEEVIAKIITIENGFKEIENIAKKIVKNNDSKKCYYLSIYLYRSEYYQVRELAVFILGFI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHH
SVTISEALLFLKDNVSKDENWRVQEILAKSFDYYCSEVGYEKALPVIKEWLNSDSPNIKR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHH
AVTEGLRIWTSRDYFKSNPDVAISLLSSLKEDDSEYLRKSVGNALRDISKKYPDLVKKEL
HHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSWDISNKKVEFVYKLASKCILAK
HCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA