| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700772
Identifier: 126700772
GI number: 126700772
Start: 3683521
End: 3684012
Strand: Direct
Name: 126700772
Synonym: CD3154
Alternate gene names: NA
Gene position: 3683521-3684012 (Clockwise)
Preceding gene: 126700771
Following gene: 126700773
Centisome position: 85.86
GC content: 25.81
Gene sequence:
>492_bases ATGATGAATAATACAATTGGAGAAAAGATTAAACAATATAGAAAATCGATAAATATGTCAAGGGATGAGCTAGCCAACAA GATTGGTTGTTCAGTTCATGCTATAGCTAAATATGAGCAAAATCAAAGAATGCCTAGTTTAGATATGATAAGAAAAATAG CTACTGCTTTATCAATTGCTATAAATAAACTCATTGTTGAAGAAAATGATTTAGATACTTTAACAAATAATAATATTAAT TTAAAAGTATTTGATAAAGAGTTGGATTTAGTAATTCACATATTAGAAAATTATGGTTATGATATAAAAACAGACTATAA AAAAAAGTTTGAAATTACAGATAATGCAGATACAATAAAACCAATTAACCTAAACTTCTCTGACTTCAAAGACTTCTCCA AAAATCTAAATTGGGTGATAAATGGTCTTGTTGAAAATTTTATACAAGAAAACTCTAATGGTCTTATTGAAGATGAGGAT GAAGAATATTAG
Upstream 100 bases:
>100_bases TATGAGTAATTTAGTATATGATATGGGATAATCTAGAAAATAACTCCTTTACATGTTTAGAAGTACAATCATTGTTTGAT GATATATTTAAGGTGAAATT
Downstream 100 bases:
>100_bases TATTGCACATTTTCAAAATATGAGTTTACCTATTAACTTTTATACATTCATAGTTAATAAATAAAAATTAGATATGAAAG GAGCTAAAATCATGAATAAA
Product: phage repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MMNNTIGEKIKQYRKSINMSRDELANKIGCSVHAIAKYEQNQRMPSLDMIRKIATALSIAINKLIVEENDLDTLTNNNIN LKVFDKELDLVIHILENYGYDIKTDYKKKFEITDNADTIKPINLNFSDFKDFSKNLNWVINGLVENFIQENSNGLIEDED EEY
Sequences:
>Translated_163_residues MMNNTIGEKIKQYRKSINMSRDELANKIGCSVHAIAKYEQNQRMPSLDMIRKIATALSIAINKLIVEENDLDTLTNNNIN LKVFDKELDLVIHILENYGYDIKTDYKKKFEITDNADTIKPINLNFSDFKDFSKNLNWVINGLVENFIQENSNGLIEDED EEY >Mature_163_residues MMNNTIGEKIKQYRKSINMSRDELANKIGCSVHAIAKYEQNQRMPSLDMIRKIATALSIAINKLIVEENDLDTLTNNNIN LKVFDKELDLVIHILENYGYDIKTDYKKKFEITDNADTIKPINLNFSDFKDFSKNLNWVINGLVENFIQENSNGLIEDED EEY
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18927; Mature: 18927
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNNTIGEKIKQYRKSINMSRDELANKIGCSVHAIAKYEQNQRMPSLDMIRKIATALSIA CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH INKLIVEENDLDTLTNNNINLKVFDKELDLVIHILENYGYDIKTDYKKKFEITDNADTIK HHHHHHCCCCCCHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEE PINLNFSDFKDFSKNLNWVINGLVENFIQENSNGLIEDEDEEY EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MMNNTIGEKIKQYRKSINMSRDELANKIGCSVHAIAKYEQNQRMPSLDMIRKIATALSIA CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH INKLIVEENDLDTLTNNNINLKVFDKELDLVIHILENYGYDIKTDYKKKFEITDNADTIK HHHHHHCCCCCCHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEE PINLNFSDFKDFSKNLNWVINGLVENFIQENSNGLIEDEDEEY EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA