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The map label for this gene is ycjC [C]

Identifier: 126700771

GI number: 126700771

Start: 3682508

End: 3683269

Strand: Direct

Name: ycjC [C]

Synonym: CD3153

Alternate gene names: 126700771

Gene position: 3682508-3683269 (Clockwise)

Preceding gene: 126700767

Following gene: 126700772

Centisome position: 85.83

GC content: 24.15

Gene sequence:

>762_bases
TTGCAAATTGGAAAAAACTTAAAAAAGATAAGAAAACAAAAAGAGCTAACGCAGATTCAACTTGCTGAAATTAGTGGCAT
CTCAAGAAATGCTCTAATAAATTATGAAAATGATAAAAGAATACCTAGTATAGATACCTTATCAAAACTCGCTAAAGCTT
TGAAAATTGAAAAGACTATCTTTTATTTTGATATTGAAAATGAAGTAATGACTAATGAAGATGTTTTATACCTTTTACAG
TCTTTATTCCCAGAAGAATACTATTCTTTTGATGAATTTTTAAATGCTATTTCAAATCTTATGGAAGATGATATTAGAAT
TACCTCAAGTTTATTGCTAGGTGCCTGGTCTGATAAAGACCAATATTATAAACTTGGTGAAAAATTAGAACTAAATGAAA
ATCAAGTTTATAATTGGATACTTTCAGATTGTATATCTAATACTGAATTAGATTTTTCATTACATCCTGATGACATAAAA
GAAATTATTAAAAATGATGTTCTTACAAAACAATCAATTGATGAATTATTAGATATTGGTCTATCAGAAGAAAGTATAGA
AACAATCTATGATTACTTTAGTGACTCAACAGATAATGGAAGTAATATTCGACTAAAAAAATTAATATCTCAAAAAGAAA
ATATTACTATTAAAAATAATGATTACTTTAAATTATTACAAGAAAATAACGAACTAAAGGAAAAAAATGAAAAGCTTGAA
AATACACTTAAAGAAATAAAAAAACTACTAACTAAAATATAA

Upstream 100 bases:

>100_bases
TAATTATAATGTCGATATATGTGTACTGTTAATAAGAATATATTATTTTTCTGTTCTCATTTGTGTACTTTTGGGATATA
CTTTATACGAGGTGATAATA

Downstream 100 bases:

>100_bases
AATAATATCAATACTATCTAAAGCAATGATAAAAAACTATGAATGGAGTTACAATTATGAATAAATCATATATGCTAAAA
TACACATATAAATCCCCTAC

Product: phage DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MQIGKNLKKIRKQKELTQIQLAEISGISRNALINYENDKRIPSIDTLSKLAKALKIEKTIFYFDIENEVMTNEDVLYLLQ
SLFPEEYYSFDEFLNAISNLMEDDIRITSSLLLGAWSDKDQYYKLGEKLELNENQVYNWILSDCISNTELDFSLHPDDIK
EIIKNDVLTKQSIDELLDIGLSEESIETIYDYFSDSTDNGSNIRLKKLISQKENITIKNNDYFKLLQENNELKEKNEKLE
NTLKEIKKLLTKI

Sequences:

>Translated_253_residues
MQIGKNLKKIRKQKELTQIQLAEISGISRNALINYENDKRIPSIDTLSKLAKALKIEKTIFYFDIENEVMTNEDVLYLLQ
SLFPEEYYSFDEFLNAISNLMEDDIRITSSLLLGAWSDKDQYYKLGEKLELNENQVYNWILSDCISNTELDFSLHPDDIK
EIIKNDVLTKQSIDELLDIGLSEESIETIYDYFSDSTDNGSNIRLKKLISQKENITIKNNDYFKLLQENNELKEKNEKLE
NTLKEIKKLLTKI
>Mature_253_residues
MQIGKNLKKIRKQKELTQIQLAEISGISRNALINYENDKRIPSIDTLSKLAKALKIEKTIFYFDIENEVMTNEDVLYLLQ
SLFPEEYYSFDEFLNAISNLMEDDIRITSSLLLGAWSDKDQYYKLGEKLELNENQVYNWILSDCISNTELDFSLHPDDIK
EIIKNDVLTKQSIDELLDIGLSEESIETIYDYFSDSTDNGSNIRLKKLISQKENITIKNNDYFKLLQENNELKEKNEKLE
NTLKEIKKLLTKI

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29600; Mature: 29600

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIGKNLKKIRKQKELTQIQLAEISGISRNALINYENDKRIPSIDTLSKLAKALKIEKTI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHEE
FYFDIENEVMTNEDVLYLLQSLFPEEYYSFDEFLNAISNLMEDDIRITSSLLLGAWSDKD
EEEECCCCCCCCHHHHHHHHHHCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QYYKLGEKLELNENQVYNWILSDCISNTELDFSLHPDDIKEIIKNDVLTKQSIDELLDIG
HHHHCCCCEECCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHCC
LSEESIETIYDYFSDSTDNGSNIRLKKLISQKENITIKNNDYFKLLQENNELKEKNEKLE
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCHHHHHHCCCHHHHHHHHHH
NTLKEIKKLLTKI
HHHHHHHHHHHCC
>Mature Secondary Structure
MQIGKNLKKIRKQKELTQIQLAEISGISRNALINYENDKRIPSIDTLSKLAKALKIEKTI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHEE
FYFDIENEVMTNEDVLYLLQSLFPEEYYSFDEFLNAISNLMEDDIRITSSLLLGAWSDKD
EEEECCCCCCCCHHHHHHHHHHCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QYYKLGEKLELNENQVYNWILSDCISNTELDFSLHPDDIKEIIKNDVLTKQSIDELLDIG
HHHHCCCCEECCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHCC
LSEESIETIYDYFSDSTDNGSNIRLKKLISQKENITIKNNDYFKLLQENNELKEKNEKLE
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCHHHHHHCCCHHHHHHHHHH
NTLKEIKKLLTKI
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA