Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126700773

Identifier: 126700773

GI number: 126700773

Start: 3684086

End: 3684856

Strand: Direct

Name: 126700773

Synonym: CD3155

Alternate gene names: NA

Gene position: 3684086-3684856 (Clockwise)

Preceding gene: 126700772

Following gene: 126700774

Centisome position: 85.87

GC content: 27.63

Gene sequence:

>771_bases
ATGAAAGGAGCTAAAATCATGAATAAATCATATATACCAAAATACACACATAAATTCCCTACTAATATACCTCATGGAGA
TAAAAAATATACTTTAACATACATTAGAAGAATGATAAGTGAATTTGTATATGATATGGGTAACCTAGAAAATAACCCCT
TCACATTCCCAGAAGTACAAACATTACTTGATGGTATAACCGTAGGCGGACATAAATTAAGTGACCAAAATCAAATACTA
AATATAAAATCATCATGGGATTATGTAATAAAATTAAGTAACAAAGAAAACTTATCTTTAAATAAAGATACAATTTGCTC
TATACATAAAATAGTTGCAAAAGATGAAGCTCTAATCGTTGGAGATTTCAGAAATGGTAATATAGGTATAGCTGGTACTA
CTCAATATGAATGCATAGAAGCCACTCTATTAAATGATTTATTTGTAAATGACATAAATATCATAAATAAAATAACTAAC
CCATTAGAAAAGGCTATAATAATAAATTTATGGTTGTCCTATTGCCAATTCTTCTATGATGGCAACAAAAGAACTGCTAG
ACTTACCTCAAACCTAATACTTATAAATAATGATATAGGAGTTCTATCAATACCAGCTAAACATAAACAAGAGTACAACA
CATTAATGCTAAACTTCTATGAAACACTAGAAGCTGATGAAGTTATAAAATTCTTATTAGAGAAATGTATTACATTCTTT
GATGGATATAACTATAAATCATATAAGGAGCTGTTTAAAAATGGCAACTAA

Upstream 100 bases:

>100_bases
ATTGAAGATGAGGATGAAGAATATTAGTATTGCACATTTTCAAAATATGAGTTTACCTATTAACTTTTATACATTCATAG
TTAATAAATAAAAATTAGAT

Downstream 100 bases:

>100_bases
AAGAGCTAATGGAGAAGGCTCTATCGGAAAATATAAAGATGGTTGGCGTTCCCGTATAATGATTGGCTATAATGAAGATG
GTAAACCACTGAGAAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Fic Family Protein; Fic Family xin-Antitoxin System Toxin Component; Fic Protein

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQTLLDGITVGGHKLSDQNQIL
NIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIVGDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITN
PLEKAIIINLWLSYCQFFYDGNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF
DGYNYKSYKELFKNGN

Sequences:

>Translated_256_residues
MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQTLLDGITVGGHKLSDQNQIL
NIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIVGDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITN
PLEKAIIINLWLSYCQFFYDGNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF
DGYNYKSYKELFKNGN
>Mature_256_residues
MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQTLLDGITVGGHKLSDQNQIL
NIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIVGDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITN
PLEKAIIINLWLSYCQFFYDGNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF
DGYNYKSYKELFKNGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29466; Mature: 29466

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQ
CCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
TLLDGITVGGHKLSDQNQILNIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIV
HHHHCCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEE
GDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITNPLEKAIIINLWLSYCQFFYD
EECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF
CCCCEEEEECCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DGYNYKSYKELFKNGN
CCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQ
CCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
TLLDGITVGGHKLSDQNQILNIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIV
HHHHCCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEE
GDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITNPLEKAIIINLWLSYCQFFYD
EECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF
CCCCEEEEECCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DGYNYKSYKELFKNGN
CCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA