| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700773
Identifier: 126700773
GI number: 126700773
Start: 3684086
End: 3684856
Strand: Direct
Name: 126700773
Synonym: CD3155
Alternate gene names: NA
Gene position: 3684086-3684856 (Clockwise)
Preceding gene: 126700772
Following gene: 126700774
Centisome position: 85.87
GC content: 27.63
Gene sequence:
>771_bases ATGAAAGGAGCTAAAATCATGAATAAATCATATATACCAAAATACACACATAAATTCCCTACTAATATACCTCATGGAGA TAAAAAATATACTTTAACATACATTAGAAGAATGATAAGTGAATTTGTATATGATATGGGTAACCTAGAAAATAACCCCT TCACATTCCCAGAAGTACAAACATTACTTGATGGTATAACCGTAGGCGGACATAAATTAAGTGACCAAAATCAAATACTA AATATAAAATCATCATGGGATTATGTAATAAAATTAAGTAACAAAGAAAACTTATCTTTAAATAAAGATACAATTTGCTC TATACATAAAATAGTTGCAAAAGATGAAGCTCTAATCGTTGGAGATTTCAGAAATGGTAATATAGGTATAGCTGGTACTA CTCAATATGAATGCATAGAAGCCACTCTATTAAATGATTTATTTGTAAATGACATAAATATCATAAATAAAATAACTAAC CCATTAGAAAAGGCTATAATAATAAATTTATGGTTGTCCTATTGCCAATTCTTCTATGATGGCAACAAAAGAACTGCTAG ACTTACCTCAAACCTAATACTTATAAATAATGATATAGGAGTTCTATCAATACCAGCTAAACATAAACAAGAGTACAACA CATTAATGCTAAACTTCTATGAAACACTAGAAGCTGATGAAGTTATAAAATTCTTATTAGAGAAATGTATTACATTCTTT GATGGATATAACTATAAATCATATAAGGAGCTGTTTAAAAATGGCAACTAA
Upstream 100 bases:
>100_bases ATTGAAGATGAGGATGAAGAATATTAGTATTGCACATTTTCAAAATATGAGTTTACCTATTAACTTTTATACATTCATAG TTAATAAATAAAAATTAGAT
Downstream 100 bases:
>100_bases AAGAGCTAATGGAGAAGGCTCTATCGGAAAATATAAAGATGGTTGGCGTTCCCGTATAATGATTGGCTATAATGAAGATG GTAAACCACTGAGAAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Fic Family Protein; Fic Family xin-Antitoxin System Toxin Component; Fic Protein
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQTLLDGITVGGHKLSDQNQIL NIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIVGDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITN PLEKAIIINLWLSYCQFFYDGNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF DGYNYKSYKELFKNGN
Sequences:
>Translated_256_residues MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQTLLDGITVGGHKLSDQNQIL NIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIVGDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITN PLEKAIIINLWLSYCQFFYDGNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF DGYNYKSYKELFKNGN >Mature_256_residues MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQTLLDGITVGGHKLSDQNQIL NIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIVGDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITN PLEKAIIINLWLSYCQFFYDGNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF DGYNYKSYKELFKNGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29466; Mature: 29466
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQ CCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH TLLDGITVGGHKLSDQNQILNIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIV HHHHCCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEE GDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITNPLEKAIIINLWLSYCQFFYD EECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF CCCCEEEEECCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DGYNYKSYKELFKNGN CCCCHHHHHHHHCCCC >Mature Secondary Structure MKGAKIMNKSYIPKYTHKFPTNIPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQ CCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH TLLDGITVGGHKLSDQNQILNIKSSWDYVIKLSNKENLSLNKDTICSIHKIVAKDEALIV HHHHCCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEE GDFRNGNIGIAGTTQYECIEATLLNDLFVNDINIINKITNPLEKAIIINLWLSYCQFFYD EECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNKRTARLTSNLILINNDIGVLSIPAKHKQEYNTLMLNFYETLEADEVIKFLLEKCITFF CCCCEEEEECCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DGYNYKSYKELFKNGN CCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA