Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700495

Identifier: 126700495

GI number: 126700495

Start: 3368314

End: 3368778

Strand: Direct

Name: 126700495

Synonym: CD2879

Alternate gene names: NA

Gene position: 3368314-3368778 (Clockwise)

Preceding gene: 126700489

Following gene: 126700503

Centisome position: 78.51

GC content: 27.74

Gene sequence:

>465_bases
ATGGTACATTTAGTATATTGTGATAATGCAGGAAAAAAAGGAGAAAAGGTCTTAGATAAAATCTTGGCTAGAACAAAAAC
AATGGTTATTAGAGGTGCTGCTGGTAGAAAAATACCACATAGTAGAGTATTTGAAGATGAGTTACTTTATTTTATGGAAA
AAGGAACTGCAAAAATATCTGCAAAAGCCACTGTTAAAAAGGTAGAAAACTATGTTAAATTAACAGAAGATGAAATTTCT
AAAATTTTAAATGAAAATCAATCAAAATTAAATTTATCTGAAAAGCAAAAAGTTCGTTGGCATAAAAAATGTTTATGCTT
AGTTGAATTTGAAAATGTTGAAGAAATAACACCTCTTGATTTTGACCATCAAGGAAATATGGATGATTGGCTTATTGTTG
AAAAAATTGAAGATGTAGTTGTTGGTACTAGTATACCTTACAATTATGAGAAGTCTAAATTTTAA

Upstream 100 bases:

>100_bases
TATTTTTTTTAAGAATTGGACACAAATACAATGACTTTTCAGTTAAACAATGATAAAATGCAATTTATAGATAAGGAATT
TAGTAGGGAGGATTCAAAAC

Downstream 100 bases:

>100_bases
AGTATCAATAACATAATACTATATTGCTAAACTCTACTTAAATAAAAAAAGAGTGCATTTAATAATTATAAAAATTATTT
TTATACACTCTTTTTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKISAKATVKKVENYVKLTEDEIS
KILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLDFDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF

Sequences:

>Translated_154_residues
MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKISAKATVKKVENYVKLTEDEIS
KILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLDFDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF
>Mature_154_residues
MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKISAKATVKKVENYVKLTEDEIS
KILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLDFDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17792; Mature: 17792

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKIS
CEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEE
AKATVKKVENYVKLTEDEISKILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLD
HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCC
FDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKIS
CEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEE
AKATVKKVENYVKLTEDEISKILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLD
HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCC
FDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA