| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is fruA [H]
Identifier: 126700187
GI number: 126700187
Start: 2969540
End: 2970646
Strand: Direct
Name: fruA [H]
Synonym: CD2568
Alternate gene names: 126700187
Gene position: 2969540-2970646 (Clockwise)
Preceding gene: 126700186
Following gene: 126700188
Centisome position: 69.22
GC content: 34.15
Gene sequence:
>1107_bases ATGAGTAAAAAAAATAAATCTCTTTTAAGTGAACTTAAGGGACACTTAATGACAGGTATCTCATATATGTTGCCACTTGT AATAGGCTCATCTTTAGTTGTAGCTATCCCAAAGCTTACAGCTTTAGCAATGGGTATAACAAGTTTAGATGCTTATAAAA ATGTATCTGGTTTTTATCATATTCTTTACTTAATGGAACAAGTTGGTTGGACTGGCATAGGTCTATTAAATACGGTATTA GCAGGATTTATAGCATTTTCAATAGGTGAGAAACCAGCTATGGGTGCAGGTTTTATTGGTGGGCTCATAGCAAGTAATAC TAATGCAGGATTCTTAGGAGCAGTAATAGCAGGTTTCTTTGCTGGGTATGTTTGTAAGTTTTTAAAGAAAAAAATTAAAA TATCTGGGTCAGCATCAGGAATGATGCCACTTATAATAATGCCACTTATAACAGTTGGATTAACTGGTTTTTTAATGAGT GTTGTATTAGCAGGACCTTTAGGAAACATAAATACTTCATTAAATGCTTGGGTAGCTGAAATGTGTCAAAATGGAACAAA TTCGGTGGTATTGGCTTTAATTTTAGGCGCAATGATAGGATTCGATTTAGGTGGACCAGTAAATAAAGCAGCTTGGATGG CAGGAAATGCATTATTGTTAGAGGGAATCTATCTACCAGCGATATTGGTAAACTGCGCAATAGTTATACCTCCACTAGGA TATGGTTTAGCTACATTCATAAGAAAATCAAAATTTTCCAATGCATTAGCTGAAACAGGAAAAGGCAATATAGTTATGGG CATAATTGGAATAACAGAAGGTGCAATTCCTTTCACTTTAACAAATCCATTAAAATTAGTTCCTGTTAATATGATAGGAT GCGCTTTGGGTGTAGGATTATCAGCTTTGTTAGGTGTACATGCTATAATGCCTCCAGTTGGTGGATTATATGGATTTATA TCAATAGGTTCTGGATGGGCTTACTTAGTAGGTGCAATATTTGGAGCTTTAGTAATAGCAATATTATCAACAACTTTAGT AGACTTCAATGAAGATGAAACTACGGAAAATACAGAATTTGATGAAATAGAGTTAGATATAATGTAA
Upstream 100 bases:
>100_bases CTCTAATATAGAATGAGAAAAATCAAAAATTAAAAAATTGTCTAATGTAATTATAACATATTATCAAAAAATATAACAAA CTTATATAGGAGGATTAAAA
Downstream 100 bases:
>100_bases ATTAAAAACTTAATTTTAGATAATTGAGAATTGAGTGTACTCTCAATTCTCAATTAAATTTTGGGAGGATTTTTATGAAA AAGACAAAAGTACATGTAGT
Product: PTS system transporter subunit IIC
Products: NA
Alternate protein names: EIIBBC-Fru; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSKKNKSLLSELKGHLMTGISYMLPLVIGSSLVVAIPKLTALAMGITSLDAYKNVSGFYHILYLMEQVGWTGIGLLNTVL AGFIAFSIGEKPAMGAGFIGGLIASNTNAGFLGAVIAGFFAGYVCKFLKKKIKISGSASGMMPLIIMPLITVGLTGFLMS VVLAGPLGNINTSLNAWVAEMCQNGTNSVVLALILGAMIGFDLGGPVNKAAWMAGNALLLEGIYLPAILVNCAIVIPPLG YGLATFIRKSKFSNALAETGKGNIVMGIIGITEGAIPFTLTNPLKLVPVNMIGCALGVGLSALLGVHAIMPPVGGLYGFI SIGSGWAYLVGAIFGALVIAILSTTLVDFNEDETTENTEFDEIELDIM
Sequences:
>Translated_368_residues MSKKNKSLLSELKGHLMTGISYMLPLVIGSSLVVAIPKLTALAMGITSLDAYKNVSGFYHILYLMEQVGWTGIGLLNTVL AGFIAFSIGEKPAMGAGFIGGLIASNTNAGFLGAVIAGFFAGYVCKFLKKKIKISGSASGMMPLIIMPLITVGLTGFLMS VVLAGPLGNINTSLNAWVAEMCQNGTNSVVLALILGAMIGFDLGGPVNKAAWMAGNALLLEGIYLPAILVNCAIVIPPLG YGLATFIRKSKFSNALAETGKGNIVMGIIGITEGAIPFTLTNPLKLVPVNMIGCALGVGLSALLGVHAIMPPVGGLYGFI SIGSGWAYLVGAIFGALVIAILSTTLVDFNEDETTENTEFDEIELDIM >Mature_367_residues SKKNKSLLSELKGHLMTGISYMLPLVIGSSLVVAIPKLTALAMGITSLDAYKNVSGFYHILYLMEQVGWTGIGLLNTVLA GFIAFSIGEKPAMGAGFIGGLIASNTNAGFLGAVIAGFFAGYVCKFLKKKIKISGSASGMMPLIIMPLITVGLTGFLMSV VLAGPLGNINTSLNAWVAEMCQNGTNSVVLALILGAMIGFDLGGPVNKAAWMAGNALLLEGIYLPAILVNCAIVIPPLGY GLATFIRKSKFSNALAETGKGNIVMGIIGITEGAIPFTLTNPLKLVPVNMIGCALGVGLSALLGVHAIMPPVGGLYGFIS IGSGWAYLVGAIFGALVIAILSTTLVDFNEDETTENTEFDEIELDIM
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=327, Percent_Identity=38.5321100917431, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1790386, Length=322, Percent_Identity=35.0931677018634, Blast_Score=178, Evalue=6e-46, Organism=Escherichia coli, GI1786951, Length=282, Percent_Identity=34.3971631205674, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI87082348, Length=333, Percent_Identity=30.03003003003, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1788729, Length=374, Percent_Identity=28.3422459893048, Blast_Score=119, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 38201; Mature: 38070
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKNKSLLSELKGHLMTGISYMLPLVIGSSLVVAIPKLTALAMGITSLDAYKNVSGFYH CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILYLMEQVGWTGIGLLNTVLAGFIAFSIGEKPAMGAGFIGGLIASNTNAGFLGAVIAGFF HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH AGYVCKFLKKKIKISGSASGMMPLIIMPLITVGLTGFLMSVVLAGPLGNINTSLNAWVAE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH MCQNGTNSVVLALILGAMIGFDLGGPVNKAAWMAGNALLLEGIYLPAILVNCAIVIPPLG HHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC YGLATFIRKSKFSNALAETGKGNIVMGIIGITEGAIPFTLTNPLKLVPVNMIGCALGVGL HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCEEEHHHHHHHHHHHHH SALLGVHAIMPPVGGLYGFISIGSGWAYLVGAIFGALVIAILSTTLVDFNEDETTENTEF HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DEIELDIM CCEEEEEC >Mature Secondary Structure SKKNKSLLSELKGHLMTGISYMLPLVIGSSLVVAIPKLTALAMGITSLDAYKNVSGFYH CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILYLMEQVGWTGIGLLNTVLAGFIAFSIGEKPAMGAGFIGGLIASNTNAGFLGAVIAGFF HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH AGYVCKFLKKKIKISGSASGMMPLIIMPLITVGLTGFLMSVVLAGPLGNINTSLNAWVAE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH MCQNGTNSVVLALILGAMIGFDLGGPVNKAAWMAGNALLLEGIYLPAILVNCAIVIPPLG HHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC YGLATFIRKSKFSNALAETGKGNIVMGIIGITEGAIPFTLTNPLKLVPVNMIGCALGVGL HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCEEEHHHHHHHHHHHHH SALLGVHAIMPPVGGLYGFISIGSGWAYLVGAIFGALVIAILSTTLVDFNEDETTENTEF HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DEIELDIM CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2254279 [H]