| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is manP [H]
Identifier: 126700186
GI number: 126700186
Start: 2969118
End: 2969426
Strand: Direct
Name: manP [H]
Synonym: CD2567
Alternate gene names: 126700186
Gene position: 2969118-2969426 (Clockwise)
Preceding gene: 126700185
Following gene: 126700187
Centisome position: 69.21
GC content: 33.98
Gene sequence:
>309_bases ATGAAAATAGTAGCTATAACATCATGTATAGCAGGATTAGCACACACACCTATGGCAGCAAAAGCTTTAGAACAAGCTGC ATCAAAAATGGGTCATGAAATCAAAGTAGAACAACAAGGTGCTATGGGACGAGTAAATACTATAACAAAAGAAGAAGCAC AAGATGCGGACTTTATACTTATAGCATCTGACCAAACTATATCTGGAATGGAAAGATTTGATGGTAAAAAAGTGATAAAA GTCAAAATAGGTATAGCGTTAAAAAAACCAGAAGCTGTCTTAACAAAGTGTATAGAAGCTATTTCTTAA
Upstream 100 bases:
>100_bases CATGTTTAATGGAGGATGATTTTACAAGTGAAGTTAAAAATGCTAGTGATGCAAGTCATTTAGTAAAATATATAACTAAT AAAATGAAGGAGGAATAATT
Downstream 100 bases:
>100_bases TAAAAAAATCTCACTCTAATATAGAATGAGAAAAATCAAAAATTAAAAAATTGTCTAATGTAATTATAACATATTATCAA AAAATATAACAAACTTATAT
Product: PTS system transporter subunit IIB
Products: NA
Alternate protein names: EIIBCA-Man; EII-Man; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component; Mannose permease IIC component; PTS system mannose-specific EIIC component; Mannose-specific phosphotransferase enzyme IIA component; PTS system mannose-specific EIIA component [H]
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MKIVAITSCIAGLAHTPMAAKALEQAASKMGHEIKVEQQGAMGRVNTITKEEAQDADFILIASDQTISGMERFDGKKVIK VKIGIALKKPEAVLTKCIEAIS
Sequences:
>Translated_102_residues MKIVAITSCIAGLAHTPMAAKALEQAASKMGHEIKVEQQGAMGRVNTITKEEAQDADFILIASDQTISGMERFDGKKVIK VKIGIALKKPEAVLTKCIEAIS >Mature_102_residues MKIVAITSCIAGLAHTPMAAKALEQAASKMGHEIKVEQQGAMGRVNTITKEEAQDADFILIASDQTISGMERFDGKKVIK VKIGIALKKPEAVLTKCIEAIS
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1445
COG function: function code G; Phosphotransferase system fructose-specific component IIB
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790387, Length=99, Percent_Identity=46.4646464646465, Blast_Score=89, Evalue=5e-20, Organism=Escherichia coli, GI87082348, Length=98, Percent_Identity=45.9183673469388, Blast_Score=87, Evalue=3e-19, Organism=Escherichia coli, GI1788492, Length=88, Percent_Identity=43.1818181818182, Blast_Score=77, Evalue=2e-16, Organism=Escherichia coli, GI1790390, Length=93, Percent_Identity=34.4086021505376, Blast_Score=69, Evalue=4e-14, Organism=Escherichia coli, GI1788730, Length=101, Percent_Identity=36.6336633663366, Blast_Score=67, Evalue=2e-13, Organism=Escherichia coli, GI1786951, Length=96, Percent_Identity=35.4166666666667, Blast_Score=65, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 10881; Mature: 10881
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVAITSCIAGLAHTPMAAKALEQAASKMGHEIKVEQQGAMGRVNTITKEEAQDADFIL CEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE IASDQTISGMERFDGKKVIKVKIGIALKKPEAVLTKCIEAIS EECCCCCCHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHCC >Mature Secondary Structure MKIVAITSCIAGLAHTPMAAKALEQAASKMGHEIKVEQQGAMGRVNTITKEEAQDADFIL CEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE IASDQTISGMERFDGKKVIKVKIGIALKKPEAVLTKCIEAIS EECCCCCCHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]