| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is hisC [H]
Identifier: 126700118
GI number: 126700118
Start: 2887567
End: 2888670
Strand: Direct
Name: hisC [H]
Synonym: CD2502
Alternate gene names: 126700118
Gene position: 2887567-2888670 (Clockwise)
Preceding gene: 126700114
Following gene: 126700121
Centisome position: 67.31
GC content: 27.81
Gene sequence:
>1104_bases ATGAAACTAAAAATTAACAAAGCTATTGAAATGCAGTTGAAAAAAAGTTATGCAATAGAATCTGGACATTCAGAAGATGT ATTCGAGATAGACTGTGGTGAAGGTATAAATACCGTGTCTTACTCAAACAAAGCTGTAGAAGCTTTTAATGCTTTAAAAT TTGATATGATAAGAGGATATCCTCATTCAATTGCTTTAAAAGATAATATAGTCGATTATTGGAAAGATTTTATAGCATTA GATACTGACAGAATTTGTTTGGCAGATGGTTCTATACATGTTATTTACCTTTTAAATAGACTATTTATTGAAAAGGGAGA TAAAGTTTTAGGATATTCACCTCAGTTCTCAGAATATGAGACAGATATAAAAATGCATGGTGCAACTTATGATTATGTTC TTTTAAAGAAAGAGGATAATTTCAAGTTTAATGAAAAAGAATTTATTGAAAAAATAAATCCAGAATATAAAGTAATTTAC ATAGACAATCCAAACAATCCTACAGGACAAATTATACCTTTATCATCAATTGAAAATATAGTAAGGGAAGCAGCTAAATA TGATATAGCAGTTATGGTAGATGAAGCTTATGGTGAATACATGCCAAAAGAAAATTCAGCTGTCAAGCTTCTAAATAATT ATGATAATGTAATTGCTTTAAAAACATTTTCAAAAGGATTTGGTTTAGCAGGACTAAGAGCAGGATATGCAGTTCTTCCA GAACAACTTGTTAGCCCTATTAAAAAGATTTCTACTCCTTACGAAGTGTCTGAAATATCTCGTAGTATTGCAGCAAATTT ATTAGATGATGTTCAATTTATAGAAGAATTAAAAGAAAAAACAAAAGATATAAAAAATCAATTATTAATTCCATGGAAAA ACCTTAATATAGCTGAAACTAGTGATACTGTATCAATTATGACAGTTGAACATAAAAACAAGGACATAGATTTACAACAA GAGTTTGCTAAATTAAAAATAAGAGTTATATCTGGAAGTGATTTTACTGGACTTGATAAAAATTTTATAAGATTTAGAAT GCCTGAAGAAAAAGAATTACCTGAAGTTATAAAAGCATTCCAAATAATCGATAATATAGAATAA
Upstream 100 bases:
>100_bases TAATATTTATATTCATTTTTACTATTATATATTTTCATAATATTTTAAATCTAGCAACTTTTATAACATTTATTATTGAC TAAATAAGGAGTGATAAAGT
Downstream 100 bases:
>100_bases ATTAGACTATTTATAAAAGGCATATTGTTAAAATCAATATGCCCTTTAATTTTTTGATTATTTTACTTCACTTCTATTTA TTAATTTGTTAAGTTCCATT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKLKINKAIEMQLKKSYAIESGHSEDVFEIDCGEGINTVSYSNKAVEAFNALKFDMIRGYPHSIALKDNIVDYWKDFIAL DTDRICLADGSIHVIYLLNRLFIEKGDKVLGYSPQFSEYETDIKMHGATYDYVLLKKEDNFKFNEKEFIEKINPEYKVIY IDNPNNPTGQIIPLSSIENIVREAAKYDIAVMVDEAYGEYMPKENSAVKLLNNYDNVIALKTFSKGFGLAGLRAGYAVLP EQLVSPIKKISTPYEVSEISRSIAANLLDDVQFIEELKEKTKDIKNQLLIPWKNLNIAETSDTVSIMTVEHKNKDIDLQQ EFAKLKIRVISGSDFTGLDKNFIRFRMPEEKELPEVIKAFQIIDNIE
Sequences:
>Translated_367_residues MKLKINKAIEMQLKKSYAIESGHSEDVFEIDCGEGINTVSYSNKAVEAFNALKFDMIRGYPHSIALKDNIVDYWKDFIAL DTDRICLADGSIHVIYLLNRLFIEKGDKVLGYSPQFSEYETDIKMHGATYDYVLLKKEDNFKFNEKEFIEKINPEYKVIY IDNPNNPTGQIIPLSSIENIVREAAKYDIAVMVDEAYGEYMPKENSAVKLLNNYDNVIALKTFSKGFGLAGLRAGYAVLP EQLVSPIKKISTPYEVSEISRSIAANLLDDVQFIEELKEKTKDIKNQLLIPWKNLNIAETSDTVSIMTVEHKNKDIDLQQ EFAKLKIRVISGSDFTGLDKNFIRFRMPEEKELPEVIKAFQIIDNIE >Mature_367_residues MKLKINKAIEMQLKKSYAIESGHSEDVFEIDCGEGINTVSYSNKAVEAFNALKFDMIRGYPHSIALKDNIVDYWKDFIAL DTDRICLADGSIHVIYLLNRLFIEKGDKVLGYSPQFSEYETDIKMHGATYDYVLLKKEDNFKFNEKEFIEKINPEYKVIY IDNPNNPTGQIIPLSSIENIVREAAKYDIAVMVDEAYGEYMPKENSAVKLLNNYDNVIALKTFSKGFGLAGLRAGYAVLP EQLVSPIKKISTPYEVSEISRSIAANLLDDVQFIEELKEKTKDIKNQLLIPWKNLNIAETSDTVSIMTVEHKNKDIDLQQ EFAKLKIRVISGSDFTGLDKNFIRFRMPEEKELPEVIKAFQIIDNIE
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=216, Percent_Identity=29.1666666666667, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788722, Length=247, Percent_Identity=27.5303643724696, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786816, Length=173, Percent_Identity=20.8092485549133, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17567369, Length=202, Percent_Identity=28.7128712871287, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71994472, Length=220, Percent_Identity=26.8181818181818, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71994476, Length=220, Percent_Identity=26.8181818181818, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322075, Length=224, Percent_Identity=26.7857142857143, Blast_Score=73, Evalue=7e-14, Organism=Drosophila melanogaster, GI28573069, Length=240, Percent_Identity=22.9166666666667, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646114, Length=240, Percent_Identity=22.9166666666667, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573067, Length=240, Percent_Identity=22.9166666666667, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573065, Length=240, Percent_Identity=22.9166666666667, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 41957; Mature: 41957
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKINKAIEMQLKKSYAIESGHSEDVFEIDCGEGINTVSYSNKAVEAFNALKFDMIRGY CEEEECHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCC PHSIALKDNIVDYWKDFIALDTDRICLADGSIHVIYLLNRLFIEKGDKVLGYSPQFSEYE CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCEEEHHHHHHHHHHCCCEEECCCCCCCCCC TDIKMHGATYDYVLLKKEDNFKFNEKEFIEKINPEYKVIYIDNPNNPTGQIIPLSSIENI CCEEECCCEEEEEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCEEEHHHHHHH VREAAKYDIAVMVDEAYGEYMPKENSAVKLLNNYDNVIALKTFSKGFGLAGLRAGYAVLP HHHHHHCCEEEEEECHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHHCCHHHHH EQLVSPIKKISTPYEVSEISRSIAANLLDDVQFIEELKEKTKDIKNQLLIPWKNLNIAET HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEECC SDTVSIMTVEHKNKDIDLQQEFAKLKIRVISGSDFTGLDKNFIRFRMPEEKELPEVIKAF CCEEEEEEEECCCCCCCHHHHHCEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHH QIIDNIE HHHHCCC >Mature Secondary Structure MKLKINKAIEMQLKKSYAIESGHSEDVFEIDCGEGINTVSYSNKAVEAFNALKFDMIRGY CEEEECHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCC PHSIALKDNIVDYWKDFIALDTDRICLADGSIHVIYLLNRLFIEKGDKVLGYSPQFSEYE CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCEEEHHHHHHHHHHCCCEEECCCCCCCCCC TDIKMHGATYDYVLLKKEDNFKFNEKEFIEKINPEYKVIYIDNPNNPTGQIIPLSSIENI CCEEECCCEEEEEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCEEEHHHHHHH VREAAKYDIAVMVDEAYGEYMPKENSAVKLLNNYDNVIALKTFSKGFGLAGLRAGYAVLP HHHHHHCCEEEEEECHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHHCCHHHHH EQLVSPIKKISTPYEVSEISRSIAANLLDDVQFIEELKEKTKDIKNQLLIPWKNLNIAET HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEECC SDTVSIMTVEHKNKDIDLQQEFAKLKIRVISGSDFTGLDKNFIRFRMPEEKELPEVIKAF CCEEEEEEEECCCCCCCHHHHHCEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHH QIIDNIE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA