| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126699907
Identifier: 126699907
GI number: 126699907
Start: 2659171
End: 2659584
Strand: Direct
Name: 126699907
Synonym: CD2292
Alternate gene names: NA
Gene position: 2659171-2659584 (Clockwise)
Preceding gene: 126699906
Following gene: 126699908
Centisome position: 61.98
GC content: 24.4
Gene sequence:
>414_bases ATGAAAGTAAAGAGTAAACGAAGTTTTATAGTGGGTATTATAGTTTGTGTGTTATGTTGTGCTAGTTTAGTTATTTATTG CATTTTAAAAGATAAAAGATTCCTAATTTCATCATTTCTTTTAATTGTAATAGCAATCTTTAATTTTTGTAATGCTTTTT CAAGAAAAGGCATTGTTGAAGAATTACACGATAGTACAGATGAAAGAGACTTGTACTTAACAATGAAAACAAGTCATATC TTAGTTAAAATTATGAATTATACATTATTTACTTTTACATTTCTTTTCATCATAGCTTATAGTGCATGGAAAAATCAATC ACTTCTAGTTATAGCTATAACACTATGTGTCATTGAGATTTTTTTATTTGTTGCATATTTACTTATCAATATATTTTTAG AGAAAAAAGAGTAA
Upstream 100 bases:
>100_bases CCTTCTCTTATGCTTGCCTATCGTATGGCACAAGTGTTTGGTACAACGATTGAAGAACTATGTTGTTTAAAAGAAAATAA AGAAATGGAGGATAAAAAAC
Downstream 100 bases:
>100_bases ATACAAGGGGTGATATAAATGTATTTTAAAACTTATATACTAAAAAGAGAAGTAAATAACAAACAACTAGAGATAACTCG AAGTTTTGACTTAGATAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVEELHDSTDERDLYLTMKTSHI LVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEIFLFVAYLLINIFLEKKE
Sequences:
>Translated_137_residues MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVEELHDSTDERDLYLTMKTSHI LVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEIFLFVAYLLINIFLEKKE >Mature_137_residues MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVEELHDSTDERDLYLTMKTSHI LVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEIFLFVAYLLINIFLEKKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15883; Mature: 15883
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ELHDSTDERDLYLTMKTSHILVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEI HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FLFVAYLLINIFLEKKE HHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ELHDSTDERDLYLTMKTSHILVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEI HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FLFVAYLLINIFLEKKE HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA