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The map label for this gene is 126699906

Identifier: 126699906

GI number: 126699906

Start: 2658954

End: 2659187

Strand: Direct

Name: 126699906

Synonym: CD2291

Alternate gene names: NA

Gene position: 2658954-2659187 (Clockwise)

Preceding gene: 126699902

Following gene: 126699907

Centisome position: 61.98

GC content: 32.48

Gene sequence:

>234_bases
ATGAAAACAAAAGTACGAGAATTTCGAACAAATATGGGTCTAACACAGCAACAACTCGCTGATTTAGTCCATGTATCAAA
CAGAACAATTATTTCTATTGAAAAAGAGCAATATAGCCCTTCTCTTATGCTTGCCTATCGTATGGCACAAGTGTTTGGTA
CAACGATTGAAGAACTATGTTGTTTAAAAGAAAATAAAGAAATGGAGGATAAAAAACATGAAAGTAAAGAGTAA

Upstream 100 bases:

>100_bases
TTTATAATACTTATCTAATGAGATTGACATTTTACTCATTTTAGGATATTATGAAGTTAACTTCACATGAAGTTAGCTTC
ATATAGAAAGAGGTTATGGA

Downstream 100 bases:

>100_bases
ACGAAGTTTTATAGTGGGTATTATAGTTTGTGTGTTATGTTGTGCTAGTTTAGTTATTTATTGCATTTTAAAAGATAAAA
GATTCCTAATTTCATCATTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MKTKVREFRTNMGLTQQQLADLVHVSNRTIISIEKEQYSPSLMLAYRMAQVFGTTIEELCCLKENKEMEDKKHESKE

Sequences:

>Translated_77_residues
MKTKVREFRTNMGLTQQQLADLVHVSNRTIISIEKEQYSPSLMLAYRMAQVFGTTIEELCCLKENKEMEDKKHESKE
>Mature_77_residues
MKTKVREFRTNMGLTQQQLADLVHVSNRTIISIEKEQYSPSLMLAYRMAQVFGTTIEELCCLKENKEMEDKKHESKE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 9038; Mature: 9038

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKVREFRTNMGLTQQQLADLVHVSNRTIISIEKEQYSPSLMLAYRMAQVFGTTIEELC
CCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
CLKENKEMEDKKHESKE
HHHCCCCHHHHHCCCCC
>Mature Secondary Structure
MKTKVREFRTNMGLTQQQLADLVHVSNRTIISIEKEQYSPSLMLAYRMAQVFGTTIEELC
CCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
CLKENKEMEDKKHESKE
HHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]