Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699908

Identifier: 126699908

GI number: 126699908

Start: 2659603

End: 2659899

Strand: Direct

Name: 126699908

Synonym: CD2293

Alternate gene names: NA

Gene position: 2659603-2659899 (Clockwise)

Preceding gene: 126699907

Following gene: 126699909

Centisome position: 61.99

GC content: 25.59

Gene sequence:

>297_bases
ATGTATTTTAAAACTTATATACTAAAAAGAGAAGTAAATAACAAACAACTAGAGATAACTCGAAGTTTTGACTTAGATAA
TCTAATTTGTACTGCAACAGAGATTTTGAAAGATAATGAGATTGATTTGATAATTACTGATGAAGTAAATAATGTTGTTT
GGAGAAATGAAAAAAGCACTCCCCCAGCAAGAGAATGCTTAGTTATAGCTATAGAAGTGTATTGGTGGTACACTTCTATT
TTTTTATTATATCATATAAATTATGTTATCAAAAAGAACTATTTAAATCGATTTTAA

Upstream 100 bases:

>100_bases
AGCTATAACACTATGTGTCATTGAGATTTTTTTATTTGTTGCATATTTACTTATCAATATATTTTTAGAGAAAAAAGAGT
AAATACAAGGGGTGATATAA

Downstream 100 bases:

>100_bases
GGTGTGTTGAATAAGGTTCTTGATAGTTTATATATTGATGAATTTCAAAAAAATAAGCACTCTTTATTATAAGGAGTGCT
TTGGTGTATGTTAATCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MYFKTYILKREVNNKQLEITRSFDLDNLICTATEILKDNEIDLIITDEVNNVVWRNEKSTPPARECLVIAIEVYWWYTSI
FLLYHINYVIKKNYLNRF

Sequences:

>Translated_98_residues
MYFKTYILKREVNNKQLEITRSFDLDNLICTATEILKDNEIDLIITDEVNNVVWRNEKSTPPARECLVIAIEVYWWYTSI
FLLYHINYVIKKNYLNRF
>Mature_98_residues
MYFKTYILKREVNNKQLEITRSFDLDNLICTATEILKDNEIDLIITDEVNNVVWRNEKSTPPARECLVIAIEVYWWYTSI
FLLYHINYVIKKNYLNRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11898; Mature: 11898

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFKTYILKREVNNKQLEITRSFDLDNLICTATEILKDNEIDLIITDEVNNVVWRNEKST
CCEEHEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
PPARECLVIAIEVYWWYTSIFLLYHINYVIKKNYLNRF
CCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYFKTYILKREVNNKQLEITRSFDLDNLICTATEILKDNEIDLIITDEVNNVVWRNEKST
CCEEHEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
PPARECLVIAIEVYWWYTSIFLLYHINYVIKKNYLNRF
CCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA