Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699462

Identifier: 126699462

GI number: 126699462

Start: 2143794

End: 2144657

Strand: Direct

Name: 126699462

Synonym: CD1853

Alternate gene names: NA

Gene position: 2143794-2144657 (Clockwise)

Preceding gene: 126699461

Following gene: 126699463

Centisome position: 49.97

GC content: 37.38

Gene sequence:

>864_bases
ATGTTTGGGATATTCGACAAAATAGAGGAGTTTTTCAAAGAGTTTCTATTAGGCGGTATCCAAGCAAACTTAGAGTCTAT
GTTTCTTGACATCAACGATAAAGTTGGTGCGATTGCAACGGATGTAGGAAAGACACCGATGGGGTGGAACGGACAGGTCT
TCAGTTTTATTAAAAGCATTAACGATTCCGTTATCATCCCCATAGCGGGGCTAATCATAACGGCAGTCCTTTGTATCGAG
CTTATCAATATGGTTATGCAAAAGAACAATATGCACGATACAGATACGTTTGATTTTTTTAAATACATCATAAAGATGTG
GATTGCCGTATGGTTAGTATCTCATGCCTTTGAGTTTTCAATGGCAGTTTTTGATGTAGCTCAGCATATGGTTAATAAAG
CAGCAGGAGTTATAAACACATCAGCAACTGTTTCCGGAAATCAGATTGTAGCAATGATTGATTCTCTAAAAGACAAAGGT
CTTGGAGAGCTTGTGATGATACTCTTTGAAACCTCTCTCATAAAGGTAGCTATACAGGTTATTTCCATTGTGATAATGCT
TGTGGTTTATGGAAGAATGTTTGAGATTTATATTTACTCATCGGTTTCAGCCATTCCATTTGCCACAATGGGAAACAAAG
AGTGGGGACAGATTGGAACAAACTATATCAAAGGATTGTTTGCCATAGGTTTACAAGGACTCTTTTTAATGGTTTGTCTT
GGAATATACGCAGTATTAGTTAAGACAATAAAGATAACAGACATACACACAAGTACCTTTACGATACTTGGATATGCGGT
TTTGCTAGGGTTAATGATGTTAAAGAGCGGAACACTGGCCAAAAGCGTATTAAATGCACACTAA

Upstream 100 bases:

>100_bases
ATCAAGCAACTTATGGCTGGAGGTGGCATAGTACTTATCGGATTAAAGCTGATTCCACTTCTTGCAAATGTACTCAGATA
AGAAGAAAAGGAGAAACTAA

Downstream 100 bases:

>100_bases
AAGAAAGGAAGGGTAATATGAACAAAAGAAAAACAGTATTTATAGTAGTAATTGGAGCAGGTATTATGGTGGTGATAGAT
AGGATCAGACTTCACAGCAA

Product: conjugative transposon membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MFGIFDKIEEFFKEFLLGGIQANLESMFLDINDKVGAIATDVGKTPMGWNGQVFSFIKSINDSVIIPIAGLIITAVLCIE
LINMVMQKNNMHDTDTFDFFKYIIKMWIAVWLVSHAFEFSMAVFDVAQHMVNKAAGVINTSATVSGNQIVAMIDSLKDKG
LGELVMILFETSLIKVAIQVISIVIMLVVYGRMFEIYIYSSVSAIPFATMGNKEWGQIGTNYIKGLFAIGLQGLFLMVCL
GIYAVLVKTIKITDIHTSTFTILGYAVLLGLMMLKSGTLAKSVLNAH

Sequences:

>Translated_287_residues
MFGIFDKIEEFFKEFLLGGIQANLESMFLDINDKVGAIATDVGKTPMGWNGQVFSFIKSINDSVIIPIAGLIITAVLCIE
LINMVMQKNNMHDTDTFDFFKYIIKMWIAVWLVSHAFEFSMAVFDVAQHMVNKAAGVINTSATVSGNQIVAMIDSLKDKG
LGELVMILFETSLIKVAIQVISIVIMLVVYGRMFEIYIYSSVSAIPFATMGNKEWGQIGTNYIKGLFAIGLQGLFLMVCL
GIYAVLVKTIKITDIHTSTFTILGYAVLLGLMMLKSGTLAKSVLNAH
>Mature_287_residues
MFGIFDKIEEFFKEFLLGGIQANLESMFLDINDKVGAIATDVGKTPMGWNGQVFSFIKSINDSVIIPIAGLIITAVLCIE
LINMVMQKNNMHDTDTFDFFKYIIKMWIAVWLVSHAFEFSMAVFDVAQHMVNKAAGVINTSATVSGNQIVAMIDSLKDKG
LGELVMILFETSLIKVAIQVISIVIMLVVYGRMFEIYIYSSVSAIPFATMGNKEWGQIGTNYIKGLFAIGLQGLFLMVCL
GIYAVLVKTIKITDIHTSTFTILGYAVLLGLMMLKSGTLAKSVLNAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31629; Mature: 31629

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGIFDKIEEFFKEFLLGGIQANLESMFLDINDKVGAIATDVGKTPMGWNGQVFSFIKSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHC
NDSVIIPIAGLIITAVLCIELINMVMQKNNMHDTDTFDFFKYIIKMWIAVWLVSHAFEFS
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MAVFDVAQHMVNKAAGVINTSATVSGNQIVAMIDSLKDKGLGELVMILFETSLIKVAIQV
HHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ISIVIMLVVYGRMFEIYIYSSVSAIPFATMGNKEWGQIGTNYIKGLFAIGLQGLFLMVCL
HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GIYAVLVKTIKITDIHTSTFTILGYAVLLGLMMLKSGTLAKSVLNAH
HHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA