Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699461

Identifier: 126699461

GI number: 126699461

Start: 2143559

End: 2143774

Strand: Direct

Name: 126699461

Synonym: CD1852

Alternate gene names: NA

Gene position: 2143559-2143774 (Clockwise)

Preceding gene: 126699460

Following gene: 126699462

Centisome position: 49.96

GC content: 40.28

Gene sequence:

>216_bases
ATGGAATTTTTTACACAGGCGGTAAATGTATTAAAGATTTTAGTTATGGCAGTAGGTGCAGGACTTGGAGCATGGGGCGT
TATTAACCTGATGGAAGGTTATGGTAATGACAATCCGGGTGCAAAAAGTCAAGGAATCAAGCAACTTATGGCTGGAGGTG
GCATAGTACTTATCGGATTAAAGCTGATTCCACTTCTTGCAAATGTACTCAGATAA

Upstream 100 bases:

>100_bases
CTTTAAGAAGCGTGAAAAAGACGGAAAGACTTACAAAAACTTTGTTGTAAAGTCATATAACAAGATTGAAAAGAAAGAAG
AAAACGAGGAGGAATAAATC

Downstream 100 bases:

>100_bases
GAAGAAAAGGAGAAACTAAATGTTTGGGATATTCGACAAAATAGAGGAGTTTTTCAAAGAGTTTCTATTAGGCGGTATCC
AAGCAAACTTAGAGTCTATG

Product: conjugative transposon membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MEFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGLKLIPLLANVLR

Sequences:

>Translated_71_residues
MEFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGLKLIPLLANVLR
>Mature_71_residues
MEFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGLKLIPLLANVLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7366; Mature: 7366

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGL
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHH
KLIPLLANVLR
HHHHHHHHHHC
>Mature Secondary Structure
MEFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGL
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHH
KLIPLLANVLR
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA