| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699463
Identifier: 126699463
GI number: 126699463
Start: 2144675
End: 2144935
Strand: Direct
Name: 126699463
Synonym: CD1854
Alternate gene names: NA
Gene position: 2144675-2144935 (Clockwise)
Preceding gene: 126699462
Following gene: 126699464
Centisome position: 49.99
GC content: 36.4
Gene sequence:
>261_bases ATGAACAAAAGAAAAACAGTATTTATAGTAGTAATTGGAGCAGGTATTATGGTGGTGATAGATAGGATCAGACTTCACAG CAAGGTAAATGACTTGGAAGAAAGAAAAAAAGACATCAGTCGCTGCCACAATGATTTTTGCCTAATGCAGGAAAGATATA ACAGAAGTACAGATGAACAGATTGTAAGTATTCAGGAAGAAATCGGCTCCGTATATGAGAATATAGAGGAGCTTTCAAAG GGTAAAGAAGATGGGAGGTAA
Upstream 100 bases:
>100_bases CGATACTTGGATATGCGGTTTTGCTAGGGTTAATGATGTTAAAGAGCGGAACACTGGCCAAAAGCGTATTAAATGCACAC TAAAAGAAAGGAAGGGTAAT
Downstream 100 bases:
>100_bases GTTATGGCGTATGTACCTATCCCCAAAGACTTAAAGAAGGTAAAAACAAAGGTGGCATTTAACTTGACTAAAAGACAGCT TATCGGGTTTACGATTGCAG
Product: conjugative transposon membrane exported protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MNKRKTVFIVVIGAGIMVVIDRIRLHSKVNDLEERKKDISRCHNDFCLMQERYNRSTDEQIVSIQEEIGSVYENIEELSK GKEDGR
Sequences:
>Translated_86_residues MNKRKTVFIVVIGAGIMVVIDRIRLHSKVNDLEERKKDISRCHNDFCLMQERYNRSTDEQIVSIQEEIGSVYENIEELSK GKEDGR >Mature_86_residues MNKRKTVFIVVIGAGIMVVIDRIRLHSKVNDLEERKKDISRCHNDFCLMQERYNRSTDEQIVSIQEEIGSVYENIEELSK GKEDGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10055; Mature: 10055
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRKTVFIVVIGAGIMVVIDRIRLHSKVNDLEERKKDISRCHNDFCLMQERYNRSTDEQ CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IVSIQEEIGSVYENIEELSKGKEDGR HHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNKRKTVFIVVIGAGIMVVIDRIRLHSKVNDLEERKKDISRCHNDFCLMQERYNRSTDEQ CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IVSIQEEIGSVYENIEELSKGKEDGR HHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA