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The map label for this gene is rsiV [H]

Identifier: 126699163

GI number: 126699163

Start: 1807104

End: 1807973

Strand: Direct

Name: rsiV [H]

Synonym: CD1559

Alternate gene names: 126699163

Gene position: 1807104-1807973 (Clockwise)

Preceding gene: 126699162

Following gene: 126699164

Centisome position: 42.12

GC content: 24.71

Gene sequence:

>870_bases
ATGACAAGCAAAGAAAGGTTAAATAAGTTAAAAGATGAGTATCATAAAATTCCAATACCCAAGAAATTAGATACTATAAT
AAATCATGAAAAAATAGAAAACATATATCGAGAGAAAAATAAAAAAGTAAATAGATTAAGATTTAAAGTTGCAATAGCCT
TTGCATGTATATTTACAGTATTAGTAAATATAAGTCCTGTATTTGCAGACAATTTTTCTAAGATACCTGTAATTGGAGCA
ATAGTAGAAGTAATAACTATAAAAAATTATAGTTTAAAAAGTGAAAATTATGAAGCTGAGATTGATATTCCTAAAATACG
AGGTTTAAAAGATAAAAACTTAGAACAAAGATTAAACAGTAGTTTTATGGAAGATGGAAAAAGGCTTTATCATCAATTCC
AAGAGAGAATGGAGAAGATACAATCATCAAAGAATAAAGGATATAAATCTTTAAGTTTGAGTTATAGTGTAAAAAATAAT
TCTAAAAAATTTCTATCAATAGAGATGACAAAAAATGAGATAGAGGCTTCATCATATGTGAGTAAAGTACATTATACTAT
TGATAAAAAAAGACAAATAGTTTTGACTTTGCCAATGCTTTTTAAAGATGATAAGTATATAAAAGTTATAAGTGATAATA
TAAAAGAACAAATGAGAGAACAAATGAAAAAGGATAGTACAAAATCCTATTTTATAGATCAAAAAAAAGACTTGCCTGTT
GAAGATTTTAAAACAATTAATAAGTATCAGGATTTTTATTTTAATAAAAATGAAGACCTTGTAATTTGTTTTGATGAATA
TGAAGTAGCACCTGGTTATATGGGCGCAGTTGAGTTTGTAATACCATATAAAGTAATAAAAGATTTGTAA

Upstream 100 bases:

>100_bases
TAGCAATAATATTGGATGAAAATGTGAATACTGTTAAAACTAGGTTATATACTGCTTTAAAAAAACTAAAATTAAAAATT
GAAGAGTAGGGATAAAAAGA

Downstream 100 bases:

>100_bases
ATTGAATAGTAGTTTATATATAAATCTTTTAAGGAGGACAATATGACTACATATAAAAAACTTAAAAAATCTATATTTAA
AATTGCTATATTTTCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTSKERLNKLKDEYHKIPIPKKLDTIINHEKIENIYREKNKKVNRLRFKVAIAFACIFTVLVNISPVFADNFSKIPVIGA
IVEVITIKNYSLKSENYEAEIDIPKIRGLKDKNLEQRLNSSFMEDGKRLYHQFQERMEKIQSSKNKGYKSLSLSYSVKNN
SKKFLSIEMTKNEIEASSYVSKVHYTIDKKRQIVLTLPMLFKDDKYIKVISDNIKEQMREQMKKDSTKSYFIDQKKDLPV
EDFKTINKYQDFYFNKNEDLVICFDEYEVAPGYMGAVEFVIPYKVIKDL

Sequences:

>Translated_289_residues
MTSKERLNKLKDEYHKIPIPKKLDTIINHEKIENIYREKNKKVNRLRFKVAIAFACIFTVLVNISPVFADNFSKIPVIGA
IVEVITIKNYSLKSENYEAEIDIPKIRGLKDKNLEQRLNSSFMEDGKRLYHQFQERMEKIQSSKNKGYKSLSLSYSVKNN
SKKFLSIEMTKNEIEASSYVSKVHYTIDKKRQIVLTLPMLFKDDKYIKVISDNIKEQMREQMKKDSTKSYFIDQKKDLPV
EDFKTINKYQDFYFNKNEDLVICFDEYEVAPGYMGAVEFVIPYKVIKDL
>Mature_288_residues
TSKERLNKLKDEYHKIPIPKKLDTIINHEKIENIYREKNKKVNRLRFKVAIAFACIFTVLVNISPVFADNFSKIPVIGAI
VEVITIKNYSLKSENYEAEIDIPKIRGLKDKNLEQRLNSSFMEDGKRLYHQFQERMEKIQSSKNKGYKSLSLSYSVKNNS
KKFLSIEMTKNEIEASSYVSKVHYTIDKKRQIVLTLPMLFKDDKYIKVISDNIKEQMREQMKKDSTKSYFIDQKKDLPVE
DFKTINKYQDFYFNKNEDLVICFDEYEVAPGYMGAVEFVIPYKVIKDL

Specific function: Anti-sigma factor for sigV. Negatively regulates sigV activity through direct interaction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729 [H]

Pfam domain/function: PF11738 DUF3298 [H]

EC number: NA

Molecular weight: Translated: 34100; Mature: 33969

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKERLNKLKDEYHKIPIPKKLDTIINHEKIENIYREKNKKVNRLRFKVAIAFACIFTV
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVNISPVFADNFSKIPVIGAIVEVITIKNYSLKSENYEAEIDIPKIRGLKDKNLEQRLNS
HHHCCHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCEEEECCHHHCCCCCCCHHHHHHH
SFMEDGKRLYHQFQERMEKIQSSKNKGYKSLSLSYSVKNNSKKFLSIEMTKNEIEASSYV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEECHHHHHHHHHH
SKVHYTIDKKRQIVLTLPMLFKDDKYIKVISDNIKEQMREQMKKDSTKSYFIDQKKDLPV
HHHHHEECCCCEEEEEEHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCH
EDFKTINKYQDFYFNKNEDLVICFDEYEVAPGYMGAVEFVIPYKVIKDL
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSKERLNKLKDEYHKIPIPKKLDTIINHEKIENIYREKNKKVNRLRFKVAIAFACIFTV
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVNISPVFADNFSKIPVIGAIVEVITIKNYSLKSENYEAEIDIPKIRGLKDKNLEQRLNS
HHHCCHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCEEEECCHHHCCCCCCCHHHHHHH
SFMEDGKRLYHQFQERMEKIQSSKNKGYKSLSLSYSVKNNSKKFLSIEMTKNEIEASSYV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEECHHHHHHHHHH
SKVHYTIDKKRQIVLTLPMLFKDDKYIKVISDNIKEQMREQMKKDSTKSYFIDQKKDLPV
HHHHHEECCCCEEEEEEHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCH
EDFKTINKYQDFYFNKNEDLVICFDEYEVAPGYMGAVEFVIPYKVIKDL
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]