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The map label for this gene is rsiV [H]

Identifier: 126699164

GI number: 126699164

Start: 1808016

End: 1808771

Strand: Direct

Name: rsiV [H]

Synonym: CD1560

Alternate gene names: 126699164

Gene position: 1808016-1808771 (Clockwise)

Preceding gene: 126699163

Following gene: 126699165

Centisome position: 42.14

GC content: 24.87

Gene sequence:

>756_bases
ATGACTACATATAAAAAACTTAAAAAATCTATATTTAAAATTGCTATATTTTCAATATGCTTATTAGTTTCATTAGTAGA
TACAAACCCTATATTTGCAGGTAGTTCCTTTAATGAAACTTCAAATAGTGATACGATAAAGGTGTTAAATGCTAAGAGTA
TCAACTTTAAACAAGACAATTATGAAGTGAATGTGAGTATTCCTAAAATAAAAGGTTTAAAAGATAAAACTTTAGAGAAT
AAATTAAACAATGAGTTTTTGCAAGATGGGAAAAAAATTTACAGTGAATTTCAAAATAAAATGAAAAAGGAAGATAATAA
GGGTCATAGATACCTAAATGTAATCCATAATGTCAAAAATAATTCTAAGGACTTTTTATCAATAGAAATGACAAAAGAAG
AGATAGAAGCTTCCTCATCTATAACTAAGAAGCATTACACTGTTGATAAAAATAGAAGAATACTATTAAATTTACCAATA
TTTTTTAAAGATAGTAGATATATTAGAGCTATAAGTGATAATATAAAAGAGCAGATGAGAAATCAAATTAAGAAAGATGA
TACAAAATCTTATTTTATAGACCAAGATAAAGACTCGCCAGTGAAAGATTTTGAATCTATAAATAAGTATCAAGATTTTT
ATTTTAATAAAAATGGAAATCTTGTGATTAGTTTTGATGAATATGAAGTAGCTCCTGGTTATATGGGAGCAGTAGAATTT
GTGATACCAAATAAAGTAATAAAAAGACTAAGATAG

Upstream 100 bases:

>100_bases
TGGTTATATGGGCGCAGTTGAGTTTGTAATACCATATAAAGTAATAAAAGATTTGTAAATTGAATAGTAGTTTATATATA
AATCTTTTAAGGAGGACAAT

Downstream 100 bases:

>100_bases
ATATATAGAAGATTTTTAGATAGACTGGTAAGGAGAGTTATATGAATATATATGAACAAGCAATAAGATTAATAGAAAAT
AATGAGGATTTCGCATTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTTYKKLKKSIFKIAIFSICLLVSLVDTNPIFAGSSFNETSNSDTIKVLNAKSINFKQDNYEVNVSIPKIKGLKDKTLEN
KLNNEFLQDGKKIYSEFQNKMKKEDNKGHRYLNVIHNVKNNSKDFLSIEMTKEEIEASSSITKKHYTVDKNRRILLNLPI
FFKDSRYIRAISDNIKEQMRNQIKKDDTKSYFIDQDKDSPVKDFESINKYQDFYFNKNGNLVISFDEYEVAPGYMGAVEF
VIPNKVIKRLR

Sequences:

>Translated_251_residues
MTTYKKLKKSIFKIAIFSICLLVSLVDTNPIFAGSSFNETSNSDTIKVLNAKSINFKQDNYEVNVSIPKIKGLKDKTLEN
KLNNEFLQDGKKIYSEFQNKMKKEDNKGHRYLNVIHNVKNNSKDFLSIEMTKEEIEASSSITKKHYTVDKNRRILLNLPI
FFKDSRYIRAISDNIKEQMRNQIKKDDTKSYFIDQDKDSPVKDFESINKYQDFYFNKNGNLVISFDEYEVAPGYMGAVEF
VIPNKVIKRLR
>Mature_250_residues
TTYKKLKKSIFKIAIFSICLLVSLVDTNPIFAGSSFNETSNSDTIKVLNAKSINFKQDNYEVNVSIPKIKGLKDKTLENK
LNNEFLQDGKKIYSEFQNKMKKEDNKGHRYLNVIHNVKNNSKDFLSIEMTKEEIEASSSITKKHYTVDKNRRILLNLPIF
FKDSRYIRAISDNIKEQMRNQIKKDDTKSYFIDQDKDSPVKDFESINKYQDFYFNKNGNLVISFDEYEVAPGYMGAVEFV
IPNKVIKRLR

Specific function: Anti-sigma factor for sigV. Negatively regulates sigV activity through direct interaction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729 [H]

Pfam domain/function: PF11738 DUF3298 [H]

EC number: NA

Molecular weight: Translated: 29307; Mature: 29176

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYKKLKKSIFKIAIFSICLLVSLVDTNPIFAGSSFNETSNSDTIKVLNAKSINFKQDN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCEECCC
YEVNVSIPKIKGLKDKTLENKLNNEFLQDGKKIYSEFQNKMKKEDNKGHRYLNVIHNVKN
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
NSKDFLSIEMTKEEIEASSSITKKHYTVDKNRRILLNLPIFFKDSRYIRAISDNIKEQMR
CCCCEEEEEECHHHHHHHHHHHHHHEEECCCCEEEEECCEEEECCHHHHHHHHHHHHHHH
NQIKKDDTKSYFIDQDKDSPVKDFESINKYQDFYFNKNGNLVISFDEYEVAPGYMGAVEF
HHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCCEEEEECCEECCCCCCCCEEE
VIPNKVIKRLR
ECCHHHHHHCC
>Mature Secondary Structure 
TTYKKLKKSIFKIAIFSICLLVSLVDTNPIFAGSSFNETSNSDTIKVLNAKSINFKQDN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCEECCC
YEVNVSIPKIKGLKDKTLENKLNNEFLQDGKKIYSEFQNKMKKEDNKGHRYLNVIHNVKN
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
NSKDFLSIEMTKEEIEASSSITKKHYTVDKNRRILLNLPIFFKDSRYIRAISDNIKEQMR
CCCCEEEEEECHHHHHHHHHHHHHHEEECCCCEEEEECCEEEECCHHHHHHHHHHHHHHH
NQIKKDDTKSYFIDQDKDSPVKDFESINKYQDFYFNKNGNLVISFDEYEVAPGYMGAVEF
HHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCCEEEEECCEECCCCCCCCEEE
VIPNKVIKRLR
ECCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]