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The map label for this gene is yqfA [C]

Identifier: 126699150

GI number: 126699150

Start: 1794284

End: 1794937

Strand: Direct

Name: yqfA [C]

Synonym: CD1546

Alternate gene names: 126699150

Gene position: 1794284-1794937 (Clockwise)

Preceding gene: 126699148

Following gene: 126699151

Centisome position: 41.82

GC content: 28.44

Gene sequence:

>654_bases
ATGTATCAATTTTTTTTAAAGGGTAGAGACCCAATAAGCAGTTTAACTCATTTTATAGGTGCTTGTTTATCTCTTTTAGC
AACTATAATTTTAGTTTTTCAATCTGTTACATTACAGGAAACTTCTCTCTTGATGATAGTATCTGTATCGGTATTTGGAC
TTTCACTAATTGCTTTATATAGTGCAAGTTCGTATTATCATTTTTTAAAGGGGACACCAGAACAAGAATTGTTTTTTAGA
AAAGTAGACCATGCAATGATTTACGTATTGATTGCTGGCTCTTATACACCAATATGTCTGAATTTTATGGAAAAAAAAGA
AGGCATAATATTTGTTACAGCAATATGGATAGTTGCATTTATTGGTATAATAATAAAAATATTTTGGATGGATGCACCTA
GATGGTTATCTACCAGTATATATTTACTTATGGGATGGGCAATTGTTTTTGATATAAATGCATTCAATTCAATTCCTAAG
GATTGCCTTAGACTATTAATTATGGAAGGTGTATCTTACTCTATAGGTGCAATTATTTATATAATTAAAAAGCCTAATAT
AAGTCCTGAGTTTGGATTTCATGAAATATTCCATATTTTTATTATGATAGGTTCTTTATTTCACTTTTTAGCAGTTTTAT
TGTATGTTTTATAG

Upstream 100 bases:

>100_bases
GTAAAAAAAACATAAAGTGGTATAATTAAATATATAATATAGTAATCAAAACTATATTTATGAATCTGATTTTTAAAATA
CATAATTGTAGGAGGACGAA

Downstream 100 bases:

>100_bases
TTTTAAAAGATTTGATTAATTGATACTAAAATTCTACAATGAATAAAATGGAACTGCCTTATATAGATTATATCTTCGAC
AATAAGACAGTTCCTTATTA

Product: hemolysin-like membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MYQFFLKGRDPISSLTHFIGACLSLLATIILVFQSVTLQETSLLMIVSVSVFGLSLIALYSASSYYHFLKGTPEQELFFR
KVDHAMIYVLIAGSYTPICLNFMEKKEGIIFVTAIWIVAFIGIIIKIFWMDAPRWLSTSIYLLMGWAIVFDINAFNSIPK
DCLRLLIMEGVSYSIGAIIYIIKKPNISPEFGFHEIFHIFIMIGSLFHFLAVLLYVL

Sequences:

>Translated_217_residues
MYQFFLKGRDPISSLTHFIGACLSLLATIILVFQSVTLQETSLLMIVSVSVFGLSLIALYSASSYYHFLKGTPEQELFFR
KVDHAMIYVLIAGSYTPICLNFMEKKEGIIFVTAIWIVAFIGIIIKIFWMDAPRWLSTSIYLLMGWAIVFDINAFNSIPK
DCLRLLIMEGVSYSIGAIIYIIKKPNISPEFGFHEIFHIFIMIGSLFHFLAVLLYVL
>Mature_217_residues
MYQFFLKGRDPISSLTHFIGACLSLLATIILVFQSVTLQETSLLMIVSVSVFGLSLIALYSASSYYHFLKGTPEQELFFR
KVDHAMIYVLIAGSYTPICLNFMEKKEGIIFVTAIWIVAFIGIIIKIFWMDAPRWLSTSIYLLMGWAIVFDINAFNSIPK
DCLRLLIMEGVSYSIGAIIYIIKKPNISPEFGFHEIFHIFIMIGSLFHFLAVLLYVL

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=217, Percent_Identity=32.7188940092166, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24706; Mature: 24706

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQFFLKGRDPISSLTHFIGACLSLLATIILVFQSVTLQETSLLMIVSVSVFGLSLIALY
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SASSYYHFLKGTPEQELFFRKVDHAMIYVLIAGSYTPICLNFMEKKEGIIFVTAIWIVAF
HCCCHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCEEEHHHHHHHHH
IGIIIKIFWMDAPRWLSTSIYLLMGWAIVFDINAFNSIPKDCLRLLIMEGVSYSIGAIIY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECHHHHCCHHHHHHHHHHHCCCCCCCEEEE
IIKKPNISPEFGFHEIFHIFIMIGSLFHFLAVLLYVL
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MYQFFLKGRDPISSLTHFIGACLSLLATIILVFQSVTLQETSLLMIVSVSVFGLSLIALY
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SASSYYHFLKGTPEQELFFRKVDHAMIYVLIAGSYTPICLNFMEKKEGIIFVTAIWIVAF
HCCCHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCEEEHHHHHHHHH
IGIIIKIFWMDAPRWLSTSIYLLMGWAIVFDINAFNSIPKDCLRLLIMEGVSYSIGAIIY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECHHHHCCHHHHHHHHHHHCCCCCCCEEEE
IIKKPNISPEFGFHEIFHIFIMIGSLFHFLAVLLYVL
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]