| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is hisZ [H]
Identifier: 126699151
GI number: 126699151
Start: 1795799
End: 1796743
Strand: Direct
Name: hisZ [H]
Synonym: CD1547
Alternate gene names: 126699151
Gene position: 1795799-1796743 (Clockwise)
Preceding gene: 126699150
Following gene: 126699152
Centisome position: 41.86
GC content: 25.4
Gene sequence:
>945_bases GTGAAATTTTTGAGGATTGAAGATGAGGTTATTTATTCTAAAAAAAGATATAAATTAAAAAGGGAAATAGATAAACTTTT TTTGGATGAAGAATATTTTCAAATAGAACCACAATTATTTGAAGAATATGATGAATTTACAACTATAAATAATAAAATTC CAGAAGAATCTATGGTAAAGGTTGTAAATGGAAAAGTAATGGTACTTAGAGCTGATATAACTACAAGTATAATAAAAAGC CTTGTACCAAGATGGGAAGATGGTTTAAAGCTTAAGCTTTTTTATAATTCATCAATATATAAAAATAAAAATACAGTTGG AATAAAAGAGATAAGACAAATAGGTTGTGAGTATCTAGGAGAAGCCTCTGTAGAAGCAGATAGAGAAGTAGTGAAATTAG CTCTTAAGATACTTGAAAAATACAATAATAATTTTATTCTAGAGGTTGGGAGTAGCAAGTATATTCATGGTTTGTTAGAA GAATTAAATTTAAATAAGAATTGTGAAAATCAAATTAAAAATTTACTATATACGAAGAACACTCATGAATTAAAAGTATA TATTGAAGAATTGAAAATTAAGCATGAAGTAAAAGAGTTATTATCAAATATTTTAAGTTTACAAGGGAATTTATATAATG TTATTGAAAAATCAAACAAGTTCTATTGTAATAATAAGATGAAGCAAGCTCTTGAAGAATTAAAGCAAGTAAATAATTTA ATTGAGGAATGTAATTTTTTAGATAAGGCTAGATTTGATTTATCAATGATTACTATGCTTGACTATTATGAAGGAATTAT GTTTAGAGGATACTACCCAAACTCATATAAAGAAATTCTTAGTGGTGGAAGATATGATTCTTTAACTAAAGAGTATGGAA AAGAAATTCCAGCCATTGGATTTACACTAAGTGTTGATGAGTTAATGAAGTATGTATATAAGTAA
Upstream 100 bases:
>100_bases TAAGAGAAAATTATAGCCATATAGGTATAAAGCCTATGTGGCTTTTTTATTGTTTTAAATTTGCAAATATAAGAGTAAAT TTAATGAAGAGGGTGAGAAT
Downstream 100 bases:
>100_bases AGTTTAGAAGGAGGGATTGCTTTGGATTATTTGACTATAGCACTAGCAAAAGGACGAATTGAAGGGGAATCATTTAAAAA ATTTAAAAAAATGGGTCTAG
Product: ATP phosphoribosyltransferase regulatory subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKFLRIEDEVIYSKKRYKLKREIDKLFLDEEYFQIEPQLFEEYDEFTTINNKIPEESMVKVVNGKVMVLRADITTSIIKS LVPRWEDGLKLKLFYNSSIYKNKNTVGIKEIRQIGCEYLGEASVEADREVVKLALKILEKYNNNFILEVGSSKYIHGLLE ELNLNKNCENQIKNLLYTKNTHELKVYIEELKIKHEVKELLSNILSLQGNLYNVIEKSNKFYCNNKMKQALEELKQVNNL IEECNFLDKARFDLSMITMLDYYEGIMFRGYYPNSYKEILSGGRYDSLTKEYGKEIPAIGFTLSVDELMKYVYK
Sequences:
>Translated_314_residues MKFLRIEDEVIYSKKRYKLKREIDKLFLDEEYFQIEPQLFEEYDEFTTINNKIPEESMVKVVNGKVMVLRADITTSIIKS LVPRWEDGLKLKLFYNSSIYKNKNTVGIKEIRQIGCEYLGEASVEADREVVKLALKILEKYNNNFILEVGSSKYIHGLLE ELNLNKNCENQIKNLLYTKNTHELKVYIEELKIKHEVKELLSNILSLQGNLYNVIEKSNKFYCNNKMKQALEELKQVNNL IEECNFLDKARFDLSMITMLDYYEGIMFRGYYPNSYKEILSGGRYDSLTKEYGKEIPAIGFTLSVDELMKYVYK >Mature_314_residues MKFLRIEDEVIYSKKRYKLKREIDKLFLDEEYFQIEPQLFEEYDEFTTINNKIPEESMVKVVNGKVMVLRADITTSIIKS LVPRWEDGLKLKLFYNSSIYKNKNTVGIKEIRQIGCEYLGEASVEADREVVKLALKILEKYNNNFILEVGSSKYIHGLLE ELNLNKNCENQIKNLLYTKNTHELKVYIEELKIKHEVKELLSNILSLQGNLYNVIEKSNKFYCNNKMKQALEELKQVNNL IEECNFLDKARFDLSMITMLDYYEGIMFRGYYPNSYKEILSGGRYDSLTKEYGKEIPAIGFTLSVDELMKYVYK
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR004517 - InterPro: IPR004516 [H]
Pfam domain/function: PF00587 tRNA-synt_2b [H]
EC number: NA
Molecular weight: Translated: 37059; Mature: 37059
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLRIEDEVIYSKKRYKLKREIDKLFLDEEYFQIEPQLFEEYDEFTTINNKIPEESMVK CCCEEECHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHH VVNGKVMVLRADITTSIIKSLVPRWEDGLKLKLFYNSSIYKNKNTVGIKEIRQIGCEYLG HHCCEEEEEECCHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHC EASVEADREVVKLALKILEKYNNNFILEVGSSKYIHGLLEELNLNKNCENQIKNLLYTKN CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC THELKVYIEELKIKHEVKELLSNILSLQGNLYNVIEKSNKFYCNNKMKQALEELKQVNNL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHH IEECNFLDKARFDLSMITMLDYYEGIMFRGYYPNSYKEILSGGRYDSLTKEYGKEIPAIG HHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCHHHHHHCCCCCCCE FTLSVDELMKYVYK EEECHHHHHHHHCC >Mature Secondary Structure MKFLRIEDEVIYSKKRYKLKREIDKLFLDEEYFQIEPQLFEEYDEFTTINNKIPEESMVK CCCEEECHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHH VVNGKVMVLRADITTSIIKSLVPRWEDGLKLKLFYNSSIYKNKNTVGIKEIRQIGCEYLG HHCCEEEEEECCHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHC EASVEADREVVKLALKILEKYNNNFILEVGSSKYIHGLLEELNLNKNCENQIKNLLYTKN CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC THELKVYIEELKIKHEVKELLSNILSLQGNLYNVIEKSNKFYCNNKMKQALEELKQVNNL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHH IEECNFLDKARFDLSMITMLDYYEGIMFRGYYPNSYKEILSGGRYDSLTKEYGKEIPAIG HHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCHHHHHHCCCCCCCE FTLSVDELMKYVYK EEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]