Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126699148

Identifier: 126699148

GI number: 126699148

Start: 1793208

End: 1793417

Strand: Direct

Name: 126699148

Synonym: CD1543A

Alternate gene names: NA

Gene position: 1793208-1793417 (Clockwise)

Preceding gene: 126699147

Following gene: 126699150

Centisome position: 41.8

GC content: 26.67

Gene sequence:

>210_bases
ATGCGAGAAGAAAAAAGTAATGAAAAGTATGATTGTTATTGGTGTAATCAAGAGAATAATTTCTGTGTAGAAATAAAAGA
TAATATAGTCATGATAGATGATGGCACTGGTACGTTAAAACAAGCCGTTTTCATAGGGTATAAACAAATCCAAATTAATT
TAAACTGTTCACATTGTCAAAACTTAAATAGAATAAAATTAAATTTGTAG

Upstream 100 bases:

>100_bases
TATAATAGATGGGATGAAATTTTAATTATAATATTTTATTAAAAATATAAAGGAAAAACCTCTTTTAATGTAGAAACTTA
TATTGAAGGAGGCGAGAATC

Downstream 100 bases:

>100_bases
AATTTTAAAATGGAAATTATTGAAGGAATTAAAAATAGAAAGTGTTAATATTTAGACTGAAAATTATATTTTATACAATA
AAAGTTTATTTAAATAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MREEKSNEKYDCYWCNQENNFCVEIKDNIVMIDDGTGTLKQAVFIGYKQIQINLNCSHCQNLNRIKLNL

Sequences:

>Translated_69_residues
MREEKSNEKYDCYWCNQENNFCVEIKDNIVMIDDGTGTLKQAVFIGYKQIQINLNCSHCQNLNRIKLNL
>Mature_69_residues
MREEKSNEKYDCYWCNQENNFCVEIKDNIVMIDDGTGTLKQAVFIGYKQIQINLNCSHCQNLNRIKLNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8146; Mature: 8146

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
7.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREEKSNEKYDCYWCNQENNFCVEIKDNIVMIDDGTGTLKQAVFIGYKQIQINLNCSHCQ
CCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCCEEEEEEEEEEEEEEECHHHCC
NLNRIKLNL
CCCEEEEEC
>Mature Secondary Structure
MREEKSNEKYDCYWCNQENNFCVEIKDNIVMIDDGTGTLKQAVFIGYKQIQINLNCSHCQ
CCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCCEEEEEEEEEEEEEEECHHHCC
NLNRIKLNL
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA