Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699110

Identifier: 126699110

GI number: 126699110

Start: 1744509

End: 1745093

Strand: Direct

Name: 126699110

Synonym: CD1507

Alternate gene names: NA

Gene position: 1744509-1745093 (Clockwise)

Preceding gene: 126699108

Following gene: 126699111

Centisome position: 40.66

GC content: 30.77

Gene sequence:

>585_bases
ATGAAAAGGTTTTTCATAGTAGTTTTAGGATGTATTTGTGTTTTAGGTATGATTTCTGGATGTAGCAAAAAAGAATCTAA
GCCAGTAGAAAAAAACAAGAATAATAGTGAATGGTTTAGTAATTTAGATACGGAGGATGTTGATGGAAATAAGGTAACAA
AAGAGATATTTTCAAATAAAGAACTTACTCTTATTAATGTCTGGACTACTTGGTGTGGACCATGTGTGGGTGAAATGCCA
GAGCTTGAAGCATTATCAAAAGAATATGAGAGTAATAATTCCAATGTAGCTATAAAGGGATTAGTTGTAGAAGTTGATAA
AACTGATATGAGAACTGGTCTTTCAAATGAAGAGAAAAATTTAGTTAAAGACATTATGAAAAAGTCAGATGCAACTTACC
AACAATTGACTGTATCTGAAGAACTTAAAAAAACTGATTTTAAAAGAGTTATGGAGTTTCCAACAACTTATTTTGTAGAC
AAGAAAGGAAACTTTGTGGGTGAGAAGGTTGTAGGTGCAAATAGTAAGGAAGATTGGAAAAAAATTATAGATGAAAGACT
AAAAATGGTAAAAGCCAATGAGTAA

Upstream 100 bases:

>100_bases
GCTCTTATTTATTAAATATAATTACTTTAATATAGAAGATAAGTTATTTTTATTTCAAGCAGCGATTTTATATACTATAT
AAATTCTAGGAGTGTGAGAT

Downstream 100 bases:

>100_bases
TTTTATTAAAGATAATAAAAAAGGCATTTCTATTATTGCAATTAGTATTATATTTATTGCATTAGGTACATATCGTGGAG
AAACAAATACAGTATTAACT

Product: thioredoxin

Products: NA

Alternate protein names: Antioxidant AhpC/TSA Family; ThiolDisulfide Interchange Protein TlpA; Thioredoxin; ThiolDisulfide Interchange Protein YneN; AhpC/TSA Family Antioxidant; Alkyl Hydroperoxide Reductase; Cytochrome C-Type Biogenesis Protein CcdA; Redoxin Domain-Containing Protein

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKRFFIVVLGCICVLGMISGCSKKESKPVEKNKNNSEWFSNLDTEDVDGNKVTKEIFSNKELTLINVWTTWCGPCVGEMP
ELEALSKEYESNNSNVAIKGLVVEVDKTDMRTGLSNEEKNLVKDIMKKSDATYQQLTVSEELKKTDFKRVMEFPTTYFVD
KKGNFVGEKVVGANSKEDWKKIIDERLKMVKANE

Sequences:

>Translated_194_residues
MKRFFIVVLGCICVLGMISGCSKKESKPVEKNKNNSEWFSNLDTEDVDGNKVTKEIFSNKELTLINVWTTWCGPCVGEMP
ELEALSKEYESNNSNVAIKGLVVEVDKTDMRTGLSNEEKNLVKDIMKKSDATYQQLTVSEELKKTDFKRVMEFPTTYFVD
KKGNFVGEKVVGANSKEDWKKIIDERLKMVKANE
>Mature_194_residues
MKRFFIVVLGCICVLGMISGCSKKESKPVEKNKNNSEWFSNLDTEDVDGNKVTKEIFSNKELTLINVWTTWCGPCVGEMP
ELEALSKEYESNNSNVAIKGLVVEVDKTDMRTGLSNEEKNLVKDIMKKSDATYQQLTVSEELKKTDFKRVMEFPTTYFVD
KKGNFVGEKVVGANSKEDWKKIIDERLKMVKANE

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22084; Mature: 22084

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFFIVVLGCICVLGMISGCSKKESKPVEKNKNNSEWFSNLDTEDVDGNKVTKEIFSNK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCC
ELTLINVWTTWCGPCVGEMPELEALSKEYESNNSNVAIKGLVVEVDKTDMRTGLSNEEKN
CEEEEEEHHHHHCHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHCCCCCHHHH
LVKDIMKKSDATYQQLTVSEELKKTDFKRVMEFPTTYFVDKKGNFVGEKVVGANSKEDWK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCHHHHH
KIIDERLKMVKANE
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKRFFIVVLGCICVLGMISGCSKKESKPVEKNKNNSEWFSNLDTEDVDGNKVTKEIFSNK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCC
ELTLINVWTTWCGPCVGEMPELEALSKEYESNNSNVAIKGLVVEVDKTDMRTGLSNEEKN
CEEEEEEHHHHHCHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHCCCCCHHHH
LVKDIMKKSDATYQQLTVSEELKKTDFKRVMEFPTTYFVDKKGNFVGEKVVGANSKEDWK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCHHHHH
KIIDERLKMVKANE
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA