| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699111
Identifier: 126699111
GI number: 126699111
Start: 1745086
End: 1745235
Strand: Direct
Name: 126699111
Synonym: CD1507A
Alternate gene names: NA
Gene position: 1745086-1745235 (Clockwise)
Preceding gene: 126699110
Following gene: 126699112
Centisome position: 40.68
GC content: 24.67
Gene sequence:
>150_bases ATGAGTAATTTTATTAAAGATAATAAAAAAGGCATTTCTATTATTGCAATTAGTATTATATTTATTGCATTAGGTACATA TCGTGGAGAAACAAATACAGTATTAACTAAAGCAATTATGATTTGTCTTGAGTGTATTGGTATTGGTTAG
Upstream 100 bases:
>100_bases GACAAGAAAGGAAACTTTGTGGGTGAGAAGGTTGTAGGTGCAAATAGTAAGGAAGATTGGAAAAAAATTATAGATGAAAG ACTAAAAATGGTAAAAGCCA
Downstream 100 bases:
>100_bases GAGAAGAGGAATGAAGTTATTATCTAAAGTAAATAATAATATAAGACTTATTACTCAAGTTGCATTTACAGCATTAACAA ATGGATATGTAAATGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MSNFIKDNKKGISIIAISIIFIALGTYRGETNTVLTKAIMICLECIGIG
Sequences:
>Translated_49_residues MSNFIKDNKKGISIIAISIIFIALGTYRGETNTVLTKAIMICLECIGIG >Mature_48_residues SNFIKDNKKGISIIAISIIFIALGTYRGETNTVLTKAIMICLECIGIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5290; Mature: 5158
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFIKDNKKGISIIAISIIFIALGTYRGETNTVLTKAIMICLECIGIG CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNFIKDNKKGISIIAISIIFIALGTYRGETNTVLTKAIMICLECIGIG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA