Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699108

Identifier: 126699108

GI number: 126699108

Start: 1741906

End: 1742700

Strand: Direct

Name: 126699108

Synonym: CD1505

Alternate gene names: NA

Gene position: 1741906-1742700 (Clockwise)

Preceding gene: 126699107

Following gene: 126699110

Centisome position: 40.6

GC content: 23.27

Gene sequence:

>795_bases
TTGAATGAATTAAAGCCATATATAAAATTTTTTAATAAAAATACTAAATTGTATATAATTATATTTATGATTGTGGGAAT
TGTTATGAATATTTTGCCAGTGTTTATCCTCAAGATTTTTGGAGAAGCATCTAAAACTAATTTATCCACGATTGTGAATC
CTATTTTAACATATATAACTATACTGCTATTTGTGTATGGAGTAAATATAGCAAATAAAGACTTTTCAGGAGCTTTAAGT
ATAAGAGCAGATAGAAAAAGTTGTATAAAAGCTATTGTCATAGATTTAATTATTTTAAGCTTTGTGATTTCTATTTTAGG
TATAGTTTTGATTTTTTTATCGAAGTTATTTATAGAAATTATAACAGGTTATAGTATAGAACTATCAGTTTTACTAAAGA
GAGATATGATTTGGACATCTATATCAGCACTGATAGATCCTTCAACATCAAGTATGCCACTAACTTATTTAAATTATTTT
GTACAAATATGTATAAATGAAATATGTATAGGTTTTATAGGAGTGTTACTTGGAGCTTTTACATATAGAGTTAGAAAAGT
TACTAGTATTACTATATTGATAGGATTACCAATATTAATGGTAATTTATATAGTTAATTTTGCAACTAAAAATATGCATA
AAATGCTATTGTATTTAGAAAAAATTATTTATTCATTTCAGAATCCTTTTATTTTATTTGGAACAAAGGTAGGAATTATA
GTTATTTGCATAATATTTATAATTTTATTACTTAGAAAAGCACCAATTAAAGAGTATGCAAATGACTTATTATAA

Upstream 100 bases:

>100_bases
TGAAAATGATGAAAAAATACTTAAAAATTCAAATATTGATGTAGGATACATAGGGCTACAAGATATGTTTGTTAACATGA
CTAAGAAGGAGGAATTGTAA

Downstream 100 bases:

>100_bases
CTAAAATAAAACCTGCTTAAAAATCAAATTTGTAAATTTGTATTTTAAAGCAGGTTTATTAGTTTTAATAAATGTTGATT
TTAAGTATTAATTTTTAATA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNELKPYIKFFNKNTKLYIIIFMIVGIVMNILPVFILKIFGEASKTNLSTIVNPILTYITILLFVYGVNIANKDFSGALS
IRADRKSCIKAIVIDLIILSFVISILGIVLIFLSKLFIEIITGYSIELSVLLKRDMIWTSISALIDPSTSSMPLTYLNYF
VQICINEICIGFIGVLLGAFTYRVRKVTSITILIGLPILMVIYIVNFATKNMHKMLLYLEKIIYSFQNPFILFGTKVGII
VICIIFIILLLRKAPIKEYANDLL

Sequences:

>Translated_264_residues
MNELKPYIKFFNKNTKLYIIIFMIVGIVMNILPVFILKIFGEASKTNLSTIVNPILTYITILLFVYGVNIANKDFSGALS
IRADRKSCIKAIVIDLIILSFVISILGIVLIFLSKLFIEIITGYSIELSVLLKRDMIWTSISALIDPSTSSMPLTYLNYF
VQICINEICIGFIGVLLGAFTYRVRKVTSITILIGLPILMVIYIVNFATKNMHKMLLYLEKIIYSFQNPFILFGTKVGII
VICIIFIILLLRKAPIKEYANDLL
>Mature_264_residues
MNELKPYIKFFNKNTKLYIIIFMIVGIVMNILPVFILKIFGEASKTNLSTIVNPILTYITILLFVYGVNIANKDFSGALS
IRADRKSCIKAIVIDLIILSFVISILGIVLIFLSKLFIEIITGYSIELSVLLKRDMIWTSISALIDPSTSSMPLTYLNYF
VQICINEICIGFIGVLLGAFTYRVRKVTSITILIGLPILMVIYIVNFATKNMHKMLLYLEKIIYSFQNPFILFGTKVGII
VICIIFIILLLRKAPIKEYANDLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29914; Mature: 29914

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELKPYIKFFNKNTKLYIIIFMIVGIVMNILPVFILKIFGEASKTNLSTIVNPILTYIT
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ILLFVYGVNIANKDFSGALSIRADRKSCIKAIVIDLIILSFVISILGIVLIFLSKLFIEI
HHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITGYSIELSVLLKRDMIWTSISALIDPSTSSMPLTYLNYFVQICINEICIGFIGVLLGAF
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYRVRKVTSITILIGLPILMVIYIVNFATKNMHKMLLYLEKIIYSFQNPFILFGTKVGII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
VICIIFIILLLRKAPIKEYANDLL
HHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MNELKPYIKFFNKNTKLYIIIFMIVGIVMNILPVFILKIFGEASKTNLSTIVNPILTYIT
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ILLFVYGVNIANKDFSGALSIRADRKSCIKAIVIDLIILSFVISILGIVLIFLSKLFIEI
HHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITGYSIELSVLLKRDMIWTSISALIDPSTSSMPLTYLNYFVQICINEICIGFIGVLLGAF
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYRVRKVTSITILIGLPILMVIYIVNFATKNMHKMLLYLEKIIYSFQNPFILFGTKVGII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
VICIIFIILLLRKAPIKEYANDLL
HHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA