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The map label for this gene is 126699098

Identifier: 126699098

GI number: 126699098

Start: 1731271

End: 1731864

Strand: Direct

Name: 126699098

Synonym: CD1494

Alternate gene names: NA

Gene position: 1731271-1731864 (Clockwise)

Preceding gene: 126699097

Following gene: 126699099

Centisome position: 40.35

GC content: 31.14

Gene sequence:

>594_bases
GTGATGGTTTTGAATAAGGACATAGGAGCAAAAATAAAGCAACTCAGAACTCAAAAGCAAATGACGCTGAAGGATATGAG
TGAAAAAACAAACTTGTCAATTGGTTTTTTATCACAACTTGAAAGAGGATTAACAAGTGTGGCAACAGATTCCTTAGGAA
AAATAGCAAGTGTACTAGATGTAGAATTAACTTACTTTTTTATGAAGCCAAAAGAGCATAAAAGAGCTGTATTAAGAAGT
TATGAAAAAGAAGTATTTGATGTAGAAAACTCAACATTTATACATTATCATTTATCATCTAGTTTAAAGGAAAAAACAAT
GCTACCAAGATTAATTGAAATTCTTCCAAGTAAGAGTAGTGAGGAAATTTGTTGTTACGTACATGAAGGTGAGGAATTTG
TGTATGTATTAGAGGGTACTCTTACAGTGTTTTTGGGAGATGAACAAATAGAAATGTATCCAGGAGACACAATACACTAT
AATAGTGAAAAGAACAATCATAATTGGGTCAACTATACTAATAAGGTAGTGAAAATTTTGGTAGTAAGTATACCAAATCC
ATTTGAAAAGTCTGATGCAGTTAAAGAAGCTTAA

Upstream 100 bases:

>100_bases
TAATACTTATAAAAATTTTTTTAAATGAAATAAAGATAGGTTCAGTACCTATATTTATATTTTTGTATTTATATTATGAA
AAAATTAAAATTATTTAGGG

Downstream 100 bases:

>100_bases
ATTTTAACGATTACTATTAGTCAATAAGGAGGTACTAAAGTGAAAAAAATTGGATTCATAGGTGCAGGAAATATGGCAAG
CGCTATGATAGGGGGAATAG

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; MerR Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Cro/CI Family; Cupin 2 Conserved Barrel Domain Protein; Transcriptional Regulator XRE Family With Cupin Sensor; Transcriptional Regulator MerR Family; Transcription Regulator; Helix-Turn-Helix Domain-Containing Protein; HTH-Type Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; Transcriptional Regulator Xre Familiy; Helix-Turn-Helix Transcriptional Regulator PuuR; Transcriptional Regulator-Like Protein; Transcriptional Regulator HTH_3 Family; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; Cupin Domain Protein; Transcriptional Regulator Xre Family; XRE Family-Like Protein; Helix-Turn-Helix/Cupin Domain Protein; Transcriptional Regulator Merr Family; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family Protein; Helix-Turn-Helix Transcriptional Regulator; Helix-Turn-Helix Family Protein; Cupin/Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MMVLNKDIGAKIKQLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLGKIASVLDVELTYFFMKPKEHKRAVLRS
YEKEVFDVENSTFIHYHLSSSLKEKTMLPRLIEILPSKSSEEICCYVHEGEEFVYVLEGTLTVFLGDEQIEMYPGDTIHY
NSEKNNHNWVNYTNKVVKILVVSIPNPFEKSDAVKEA

Sequences:

>Translated_197_residues
MMVLNKDIGAKIKQLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLGKIASVLDVELTYFFMKPKEHKRAVLRS
YEKEVFDVENSTFIHYHLSSSLKEKTMLPRLIEILPSKSSEEICCYVHEGEEFVYVLEGTLTVFLGDEQIEMYPGDTIHY
NSEKNNHNWVNYTNKVVKILVVSIPNPFEKSDAVKEA
>Mature_197_residues
MMVLNKDIGAKIKQLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLGKIASVLDVELTYFFMKPKEHKRAVLRS
YEKEVFDVENSTFIHYHLSSSLKEKTMLPRLIEILPSKSSEEICCYVHEGEEFVYVLEGTLTVFLGDEQIEMYPGDTIHY
NSEKNNHNWVNYTNKVVKILVVSIPNPFEKSDAVKEA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22601; Mature: 22601

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVLNKDIGAKIKQLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLGKIASVLD
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELTYFFMKPKEHKRAVLRSYEKEVFDVENSTFIHYHLSSSLKEKTMLPRLIEILPSKSS
HEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC
EEICCYVHEGEEFVYVLEGTLTVFLGDEQIEMYPGDTIHYNSEKNNHNWVNYTNKVVKIL
CCEEEEEECCCEEEEEEECEEEEEECCCEEEECCCCEEEECCCCCCCCCHHHHHHEEEEE
VVSIPNPFEKSDAVKEA
EEECCCCCCCCCCCCCC
>Mature Secondary Structure
MMVLNKDIGAKIKQLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLGKIASVLD
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELTYFFMKPKEHKRAVLRSYEKEVFDVENSTFIHYHLSSSLKEKTMLPRLIEILPSKSS
HEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCC
EEICCYVHEGEEFVYVLEGTLTVFLGDEQIEMYPGDTIHYNSEKNNHNWVNYTNKVVKIL
CCEEEEEECCCEEEEEEECEEEEEECCCEEEECCCCEEEECCCCCCCCCHHHHHHEEEEE
VVSIPNPFEKSDAVKEA
EEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA