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The map label for this gene is ybgL [C]

Identifier: 126698987

GI number: 126698987

Start: 1602942

End: 1603733

Strand: Direct

Name: ybgL [C]

Synonym: CD1384

Alternate gene names: 126698987

Gene position: 1602942-1603733 (Clockwise)

Preceding gene: 126698985

Following gene: 126698988

Centisome position: 37.36

GC content: 32.2

Gene sequence:

>792_bases
TTGTATAAAGTAGATTTAAATAGTGATTTAGGAGAAAGTTTTGGAACGTATAAGATTGGTTTAGATGAAGAAGTTTTAAA
ATATATTTCATCAGCTAATATAGCTTGTGGGTTTCATGCAGGTGACCCTAGTCATATGGAAAAAACAGTACAGCTAGCTA
AAAAAAATGGAGTGAAAATAGGCGCACATCCAGGTTTCCTAGATTTAATAGGATTTGGAAGACGTGAGATGAAAATAACA
AAGCAGGAAGCTAAAGATTATACAAAATATCAATTGGGTGCTTTAATGGCATTTGCAAGTTCAAATGGATGTAATATACA
ACATGTAAAACCACATGGAGCATTATACAATATGGCAGCTAAAGATAAAGAGTTAGCTATGGGGATTTGTGAAGCTATAT
ATGAAGTCGATAAAGATATTATACTGTTGGGGCTATATAATAGTGAAATGATAAATTCTGCTAAAGAAATTGGACTTAGG
TTTGCAAATGAAGTATTTGCAGATAGAGCTTATGATAATAATGGTTTTTTGGTTCCAAGAAGTGTAGAAGGAGCAGTTAT
ACATGATACAAAACATGCAATAGATAGGGTTGTTAGGATGGTAAAAGAAGGAACTGTAGAAACTTTAACAGGTGAAGTTA
TACATATCAAAGCAGATTCTATATGTGTACATGGGGACAATCCAAAAGCAATAGAGTTTGTCAAAGAAATAAGAAAGCGT
TTTGAATTAGAAAGTATAGAAGTTTGTCCATTAGAAAACATAGAAGTTTGTTCGTCAGAGAACATAGTATAA

Upstream 100 bases:

>100_bases
ATACAAGTGATAAAATATTTCATGCAATATATAAAATAAACAAAATTTAAAAATTAAAACTACTTATTCTATCAAAATGT
TAGCGAGGAGGGGTCATAAA

Downstream 100 bases:

>100_bases
GACTGATAACATGAGGGGGAGATAAAATATGAGTACAAAAAATATTACAGATAAAACTAAAAATAAAAAAGATGTCGGAG
CACTTATAGGGGCTGCATTT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MYKVDLNSDLGESFGTYKIGLDEEVLKYISSANIACGFHAGDPSHMEKTVQLAKKNGVKIGAHPGFLDLIGFGRREMKIT
KQEAKDYTKYQLGALMAFASSNGCNIQHVKPHGALYNMAAKDKELAMGICEAIYEVDKDIILLGLYNSEMINSAKEIGLR
FANEVFADRAYDNNGFLVPRSVEGAVIHDTKHAIDRVVRMVKEGTVETLTGEVIHIKADSICVHGDNPKAIEFVKEIRKR
FELESIEVCPLENIEVCSSENIV

Sequences:

>Translated_263_residues
MYKVDLNSDLGESFGTYKIGLDEEVLKYISSANIACGFHAGDPSHMEKTVQLAKKNGVKIGAHPGFLDLIGFGRREMKIT
KQEAKDYTKYQLGALMAFASSNGCNIQHVKPHGALYNMAAKDKELAMGICEAIYEVDKDIILLGLYNSEMINSAKEIGLR
FANEVFADRAYDNNGFLVPRSVEGAVIHDTKHAIDRVVRMVKEGTVETLTGEVIHIKADSICVHGDNPKAIEFVKEIRKR
FELESIEVCPLENIEVCSSENIV
>Mature_263_residues
MYKVDLNSDLGESFGTYKIGLDEEVLKYISSANIACGFHAGDPSHMEKTVQLAKKNGVKIGAHPGFLDLIGFGRREMKIT
KQEAKDYTKYQLGALMAFASSNGCNIQHVKPHGALYNMAAKDKELAMGICEAIYEVDKDIILLGLYNSEMINSAKEIGLR
FANEVFADRAYDNNGFLVPRSVEGAVIHDTKHAIDRVVRMVKEGTVETLTGEVIHIKADSICVHGDNPKAIEFVKEIRKR
FELESIEVCPLENIEVCSSENIV

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=246, Percent_Identity=45.9349593495935, Blast_Score=226, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1384_CLOD6 (Q18BQ3)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001087884.1
- ProteinModelPortal:   Q18BQ3
- SMR:   Q18BQ3
- STRING:   Q18BQ3
- GeneID:   4914819
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD1384
- NMPDR:   fig|1496.1.peg.3500
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 29130; Mature: 29130

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKVDLNSDLGESFGTYKIGLDEEVLKYISSANIACGFHAGDPSHMEKTVQLAKKNGVKI
CEEEECCCCCCCCCCCEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHPGFLDLIGFGRREMKITKQEAKDYTKYQLGALMAFASSNGCNIQHVKPHGALYNMAA
CCCCCHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCEEHHHC
KDKELAMGICEAIYEVDKDIILLGLYNSEMINSAKEIGLRFANEVFADRAYDNNGFLVPR
CCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
SVEGAVIHDTKHAIDRVVRMVKEGTVETLTGEVIHIKADSICVHGDNPKAIEFVKEIRKR
CCCCEEEECHHHHHHHHHHHHHCCCCEEECCCEEEEEECEEEEECCCCHHHHHHHHHHHH
FELESIEVCPLENIEVCSSENIV
CCCCCEEECCCCCCEECCCCCCC
>Mature Secondary Structure
MYKVDLNSDLGESFGTYKIGLDEEVLKYISSANIACGFHAGDPSHMEKTVQLAKKNGVKI
CEEEECCCCCCCCCCCEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHPGFLDLIGFGRREMKITKQEAKDYTKYQLGALMAFASSNGCNIQHVKPHGALYNMAA
CCCCCHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCEEHHHC
KDKELAMGICEAIYEVDKDIILLGLYNSEMINSAKEIGLRFANEVFADRAYDNNGFLVPR
CCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
SVEGAVIHDTKHAIDRVVRMVKEGTVETLTGEVIHIKADSICVHGDNPKAIEFVKEIRKR
CCCCEEEECHHHHHHHHHHHHHCCCCEEECCCEEEEEECEEEEECCCCHHHHHHHHHHHH
FELESIEVCPLENIEVCSSENIV
CCCCCEEECCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA