| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is glpK2 [H]
Identifier: 126698985
GI number: 126698985
Start: 1600097
End: 1601611
Strand: Direct
Name: glpK2 [H]
Synonym: CD1382
Alternate gene names: 126698985
Gene position: 1600097-1601611 (Clockwise)
Preceding gene: 126698981
Following gene: 126698987
Centisome position: 37.3
GC content: 33.53
Gene sequence:
>1515_bases ATGGAAAAGAAGTATGTAATGGCATTAGACCAAGGAACAACCAGTTCAAGAGCTATACTATTTAATAAAAAAGGCGAAAT AGTGAAAATTGCACAAAAAGAGTTCAATCAAATTTATCCAAAAGCTGGATGGGTAGAGCATGACCCTATGGAAATATGGG GGTCACAAAGTGGGGTAATGAGAGAAGTTATAGAAACAGCAGGTATAAGACCAGAAGAAATTGCTTCAATAGGGATAACT AATCAAAGAGAGACTACGGTTGTTTGGAGTAGGTATACTGGTAAACCTATTTATAACGCAATAGTATGGCAGTGTAGGAG AACGTCAGAAATATGTGATGAACTTAAAAATAAAGGATTGGAAGAATCAATAAAAGAAAAAACAGGTCTTTTAATAGATG CATACTTTTCAGCAACAAAAGTAAAATGGATATTAGATAATGTAGAAGGAGCTAGGGAAAAAGCAGAACAAGGAGAGTTA TTATTTGGAACTATAGATACATGGTTAATATGGAATTTAACTCGTGGAAAAGTACATGTAACAGATTACTCAAATGCATC TAGAACAATGATGTACAATATAAATGATTTAGAATGGGATGAGGATATATTACGAGAATTGAACATACCAATAAGCATGT TGCCATTAGTAAAACCTTCTAGCTATGTTTATGGTCATACAGATGAGCGCATGTTATCAGGAGCTAAAATACCTATTGCG GGATGTGCTGGAGACCAACAAGCAGCATTATTTGGTCAAAATTGTGTTGAAGAAGGTACTGCAAAAAATACTTATGGAAC GGGTTGTTTCTTGCTTATGAATACAGGCAGTAACATAGTTAAATCTAAGCATGGGTTACTTACAACAATTGCTTGGGGAG TTGATGGAAAAGTAACATATGCATTAGAAGGAAGTATATTTATTGGAGGAGCATCTGTTCAATGGCTTAGAGATGAATTA AAGATAATTGAATCTGCAAAAGATAGTGAAATGTATGCAAATAGGGTAGAGGATACTAATGGTGTATATGTAGTGCCAGC ATTTACAGGTCTTGGAGCTCCATATTGGGATATGTATGCTAGGGGTTCAATTTTAGGACTTACAAGAGGAGCAAAAAAAG AACATATAGTAAGAGCCACATTGGAATCAATTGCTTATCAGACAAAGGATGTTTTAGAAGCAATGCAAAACGATTCAAAA TTAAAACTAAAATCATTAAAAGTTGATGGTGGAGCAAGTAATAATAATTTTTTAATGCAATTTCAATCAGATATATTAAA TGTAGATATAGATAGACCCAAAATAGTAGAAACTACAGCTTTAGGAGCTGCTTATTTAGCAGGGTTGTCTGTTGGATTTT ATATTGGAAGAAATGAAATTACTTCAAAGTGGTCAGTAGAAAAAGAGTTTAATCCAAATATGAGTGAAGAGAAGAGATGT AAATTATATAAAGGATGGAAAAAAGCTGTATCGAGAGCTTTAAGCTGGGAAAAAGAAGATGAATTGGATATTTAA
Upstream 100 bases:
>100_bases ATATTAAATTTGTATTTAAGTATGATTATTTATTGAAATATGTGATATTAAATTTTTCTTTTTAATAAATTAAATATTAT ATGATAAGGAGAATATGGTG
Downstream 100 bases:
>100_bases AAATTAATCAAAGTTAAATTTATTTGAATTTAAAAAGAGCTTTATGTAAAATATGAAGCTCTTTTTTTGTTGTTAATTTT GCATTTTTATATAATCACAC
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MEKKYVMALDQGTTSSRAILFNKKGEIVKIAQKEFNQIYPKAGWVEHDPMEIWGSQSGVMREVIETAGIRPEEIASIGIT NQRETTVVWSRYTGKPIYNAIVWQCRRTSEICDELKNKGLEESIKEKTGLLIDAYFSATKVKWILDNVEGAREKAEQGEL LFGTIDTWLIWNLTRGKVHVTDYSNASRTMMYNINDLEWDEDILRELNIPISMLPLVKPSSYVYGHTDERMLSGAKIPIA GCAGDQQAALFGQNCVEEGTAKNTYGTGCFLLMNTGSNIVKSKHGLLTTIAWGVDGKVTYALEGSIFIGGASVQWLRDEL KIIESAKDSEMYANRVEDTNGVYVVPAFTGLGAPYWDMYARGSILGLTRGAKKEHIVRATLESIAYQTKDVLEAMQNDSK LKLKSLKVDGGASNNNFLMQFQSDILNVDIDRPKIVETTALGAAYLAGLSVGFYIGRNEITSKWSVEKEFNPNMSEEKRC KLYKGWKKAVSRALSWEKEDELDI
Sequences:
>Translated_504_residues MEKKYVMALDQGTTSSRAILFNKKGEIVKIAQKEFNQIYPKAGWVEHDPMEIWGSQSGVMREVIETAGIRPEEIASIGIT NQRETTVVWSRYTGKPIYNAIVWQCRRTSEICDELKNKGLEESIKEKTGLLIDAYFSATKVKWILDNVEGAREKAEQGEL LFGTIDTWLIWNLTRGKVHVTDYSNASRTMMYNINDLEWDEDILRELNIPISMLPLVKPSSYVYGHTDERMLSGAKIPIA GCAGDQQAALFGQNCVEEGTAKNTYGTGCFLLMNTGSNIVKSKHGLLTTIAWGVDGKVTYALEGSIFIGGASVQWLRDEL KIIESAKDSEMYANRVEDTNGVYVVPAFTGLGAPYWDMYARGSILGLTRGAKKEHIVRATLESIAYQTKDVLEAMQNDSK LKLKSLKVDGGASNNNFLMQFQSDILNVDIDRPKIVETTALGAAYLAGLSVGFYIGRNEITSKWSVEKEFNPNMSEEKRC KLYKGWKKAVSRALSWEKEDELDI >Mature_504_residues MEKKYVMALDQGTTSSRAILFNKKGEIVKIAQKEFNQIYPKAGWVEHDPMEIWGSQSGVMREVIETAGIRPEEIASIGIT NQRETTVVWSRYTGKPIYNAIVWQCRRTSEICDELKNKGLEESIKEKTGLLIDAYFSATKVKWILDNVEGAREKAEQGEL LFGTIDTWLIWNLTRGKVHVTDYSNASRTMMYNINDLEWDEDILRELNIPISMLPLVKPSSYVYGHTDERMLSGAKIPIA GCAGDQQAALFGQNCVEEGTAKNTYGTGCFLLMNTGSNIVKSKHGLLTTIAWGVDGKVTYALEGSIFIGGASVQWLRDEL KIIESAKDSEMYANRVEDTNGVYVVPAFTGLGAPYWDMYARGSILGLTRGAKKEHIVRATLESIAYQTKDVLEAMQNDSK LKLKSLKVDGGASNNNFLMQFQSDILNVDIDRPKIVETTALGAAYLAGLSVGFYIGRNEITSKWSVEKEFNPNMSEEKRC KLYKGWKKAVSRALSWEKEDELDI
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=511, Percent_Identity=46.7710371819961, Blast_Score=434, Evalue=1e-122, Organism=Homo sapiens, GI4504007, Length=511, Percent_Identity=46.7710371819961, Blast_Score=434, Evalue=1e-121, Organism=Homo sapiens, GI41393575, Length=511, Percent_Identity=46.5753424657534, Blast_Score=431, Evalue=1e-121, Organism=Homo sapiens, GI42794763, Length=515, Percent_Identity=46.4077669902913, Blast_Score=431, Evalue=1e-121, Organism=Homo sapiens, GI88196792, Length=512, Percent_Identity=34.1796875, Blast_Score=332, Evalue=4e-91, Organism=Escherichia coli, GI1790361, Length=500, Percent_Identity=65.2, Blast_Score=704, Evalue=0.0, Organism=Escherichia coli, GI1787789, Length=475, Percent_Identity=25.6842105263158, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1790005, Length=464, Percent_Identity=23.0603448275862, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1789987, Length=480, Percent_Identity=21.875, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789138, Length=315, Percent_Identity=26.984126984127, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789168, Length=493, Percent_Identity=21.9066937119675, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17535599, Length=504, Percent_Identity=43.6507936507937, Blast_Score=411, Evalue=1e-115, Organism=Caenorhabditis elegans, GI71986140, Length=530, Percent_Identity=26.4150943396226, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71986147, Length=266, Percent_Identity=31.5789473684211, Blast_Score=130, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321755, Length=552, Percent_Identity=36.231884057971, Blast_Score=315, Evalue=1e-86, Organism=Drosophila melanogaster, GI17864214, Length=512, Percent_Identity=44.53125, Blast_Score=425, Evalue=1e-119, Organism=Drosophila melanogaster, GI24654573, Length=451, Percent_Identity=45.2328159645233, Blast_Score=389, Evalue=1e-108, Organism=Drosophila melanogaster, GI24655555, Length=503, Percent_Identity=39.5626242544732, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI24655560, Length=503, Percent_Identity=39.5626242544732, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI24655570, Length=503, Percent_Identity=39.5626242544732, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI24655574, Length=503, Percent_Identity=39.5626242544732, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI24655565, Length=503, Percent_Identity=39.5626242544732, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI19922058, Length=543, Percent_Identity=33.5174953959484, Blast_Score=291, Evalue=5e-79, Organism=Drosophila melanogaster, GI24652871, Length=510, Percent_Identity=33.921568627451, Blast_Score=275, Evalue=7e-74, Organism=Drosophila melanogaster, GI24656367, Length=513, Percent_Identity=28.2651072124756, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI21357867, Length=525, Percent_Identity=27.047619047619, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24656372, Length=349, Percent_Identity=29.7994269340974, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI45552909, Length=290, Percent_Identity=28.9655172413793, Blast_Score=129, Evalue=4e-30,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 56440; Mature: 56440
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKYVMALDQGTTSSRAILFNKKGEIVKIAQKEFNQIYPKAGWVEHDPMEIWGSQSGVM CCCCEEEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHH REVIETAGIRPEEIASIGITNQRETTVVWSRYTGKPIYNAIVWQCRRTSEICDELKNKGL HHHHHHCCCCHHHHHEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCH EESIKEKTGLLIDAYFSATKVKWILDNVEGAREKAEQGELLFGTIDTWLIWNLTRGKVHV HHHHHHHCCEEEEEECCHHEEEEEHHCCHHHHHHHHCCCEEEEEECEEEEEEEECCEEEE TDYSNASRTMMYNINDLEWDEDILRELNIPISMLPLVKPSSYVYGHTDERMLSGAKIPIA EECCCCCCEEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCEEECCCHHHHHCCCCCEEE GCAGDQQAALFGQNCVEEGTAKNTYGTGCFLLMNTGSNIVKSKHGLLTTIAWGVDGKVTY ECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCCCEEEEEEECCCCEEEE ALEGSIFIGGASVQWLRDELKIIESAKDSEMYANRVEDTNGVYVVPAFTGLGAPYWDMYA EEECEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHH RGSILGLTRGAKKEHIVRATLESIAYQTKDVLEAMQNDSKLKLKSLKVDGGASNNNFLMQ CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEE FQSDILNVDIDRPKIVETTALGAAYLAGLSVGFYIGRNEITSKWSVEKEFNPNMSEEKRC EECCCEEEECCCCCEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHH KLYKGWKKAVSRALSWEKEDELDI HHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEKKYVMALDQGTTSSRAILFNKKGEIVKIAQKEFNQIYPKAGWVEHDPMEIWGSQSGVM CCCCEEEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHH REVIETAGIRPEEIASIGITNQRETTVVWSRYTGKPIYNAIVWQCRRTSEICDELKNKGL HHHHHHCCCCHHHHHEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCH EESIKEKTGLLIDAYFSATKVKWILDNVEGAREKAEQGELLFGTIDTWLIWNLTRGKVHV HHHHHHHCCEEEEEECCHHEEEEEHHCCHHHHHHHHCCCEEEEEECEEEEEEEECCEEEE TDYSNASRTMMYNINDLEWDEDILRELNIPISMLPLVKPSSYVYGHTDERMLSGAKIPIA EECCCCCCEEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCEEECCCHHHHHCCCCCEEE GCAGDQQAALFGQNCVEEGTAKNTYGTGCFLLMNTGSNIVKSKHGLLTTIAWGVDGKVTY ECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCCCEEEEEEECCCCEEEE ALEGSIFIGGASVQWLRDELKIIESAKDSEMYANRVEDTNGVYVVPAFTGLGAPYWDMYA EEECEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHH RGSILGLTRGAKKEHIVRATLESIAYQTKDVLEAMQNDSKLKLKSLKVDGGASNNNFLMQ CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEE FQSDILNVDIDRPKIVETTALGAAYLAGLSVGFYIGRNEITSKWSVEKEFNPNMSEEKRC EECCCEEEECCCCCEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHH KLYKGWKKAVSRALSWEKEDELDI HHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA