| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698961
Identifier: 126698961
GI number: 126698961
Start: 1575972
End: 1576412
Strand: Direct
Name: 126698961
Synonym: CD1361
Alternate gene names: NA
Gene position: 1575972-1576412 (Clockwise)
Preceding gene: 126698960
Following gene: 126698962
Centisome position: 36.73
GC content: 24.04
Gene sequence:
>441_bases ATGGAAAACAAAAAAGATATATTATTTAAAGAAACAGATAAAAGATTACATAATTATAAGTATTTGGATATAAAGATAAA GAATATTAACTTGGACATAAAAAGATGTGAGAATGAATACTCTGGATGTGGAGCAATGGTATATACAGAAAAGACTAGTA ACACATATAACATAAGCTCTTCTGTGGAAAATGAGGTGTTAAAAAGAGAGGAAAGATTAAGAAAATTAAAAATGGAAAAA GAAGATATAGAAATAGAAAAAGAGAAGATAGAAAATGCTCTAACGTGTCTAAATGATATAGAAATGGAATTTTTTAATCT TTTTTATAATAGTAAGACAAAAAACAATATGACATATATTTCTATGAAACTACACTTAGATAGAACATCTTGCTACAATT TAAAGAAAAAGATGATATTTAAATTGAGTGAGATATTATAA
Upstream 100 bases:
>100_bases ATATGTTCTTGAAAGTTGTGAGATTAGTAAAAAACTGTGCACTAAAGAGATTATTGTAAATTTGAAGCTAATAATAAGTA TATAAAAAAGGAGAAGTACT
Downstream 100 bases:
>100_bases AAAATAGGACAATTTTACAACACTTTATATACACCATTGCAACAATAGGCAATAAAATATGTGAGATAATGTTATTGTGA AAGAAATCCATATTGAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MENKKDILFKETDKRLHNYKYLDIKIKNINLDIKRCENEYSGCGAMVYTEKTSNTYNISSSVENEVLKREERLRKLKMEK EDIEIEKEKIENALTCLNDIEMEFFNLFYNSKTKNNMTYISMKLHLDRTSCYNLKKKMIFKLSEIL
Sequences:
>Translated_146_residues MENKKDILFKETDKRLHNYKYLDIKIKNINLDIKRCENEYSGCGAMVYTEKTSNTYNISSSVENEVLKREERLRKLKMEK EDIEIEKEKIENALTCLNDIEMEFFNLFYNSKTKNNMTYISMKLHLDRTSCYNLKKKMIFKLSEIL >Mature_146_residues MENKKDILFKETDKRLHNYKYLDIKIKNINLDIKRCENEYSGCGAMVYTEKTSNTYNISSSVENEVLKREERLRKLKMEK EDIEIEKEKIENALTCLNDIEMEFFNLFYNSKTKNNMTYISMKLHLDRTSCYNLKKKMIFKLSEIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17578; Mature: 17578
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKKDILFKETDKRLHNYKYLDIKIKNINLDIKRCENEYSGCGAMVYTEKTSNTYNISS CCCCCCCEEEHHHHHHHCEEEEEEEEEEECEEHHHHCCCCCCCCEEEEEECCCCEEECCH SVENEVLKREERLRKLKMEKEDIEIEKEKIENALTCLNDIEMEFFNLFYNSKTKNNMTYI HHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SMKLHLDRTSCYNLKKKMIFKLSEIL EEEEEECCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MENKKDILFKETDKRLHNYKYLDIKIKNINLDIKRCENEYSGCGAMVYTEKTSNTYNISS CCCCCCCEEEHHHHHHHCEEEEEEEEEEECEEHHHHCCCCCCCCEEEEEECCCCEEECCH SVENEVLKREERLRKLKMEKEDIEIEKEKIENALTCLNDIEMEFFNLFYNSKTKNNMTYI HHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SMKLHLDRTSCYNLKKKMIFKLSEIL EEEEEECCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA