Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698962

Identifier: 126698962

GI number: 126698962

Start: 1576661

End: 1577104

Strand: Direct

Name: 126698962

Synonym: CD1362

Alternate gene names: NA

Gene position: 1576661-1577104 (Clockwise)

Preceding gene: 126698961

Following gene: 126698963

Centisome position: 36.75

GC content: 25.9

Gene sequence:

>444_bases
TTGCTTAAATACAAGGAAATATTAGAAACAATTATTGAGATTCTCAAAAAAAACTTTACTGAAAGTATTTTTATTGATGA
TGAAAGTGTGCAAGGCTCTGAAGGGTCTTGTTTTTTTGTAAGTATACTATCAGTTATTTGTACACCTGTAATGTTAAATA
CGAATAACAAAGATATTGTTATCTCTATAAAATACTTACCAAAACCACAGTCAAAGAGTATTAGAATGTATGAAGTTTCA
GATGAATTAAATAAGCTATTTAACAGAAATATAAAGGTAACAGACAGAAAATTAAATATAACAAAGCTAGAACAAAGTAT
TAAAAAAGAAGAGTCAATTTATGTATTGAACTTTACACTTACACTAAACTATCTGGATAGTGTATATGAAGAAGATGTAG
TATATGAAAATATGGAAGAAATCAATTTAAATTTAGGAGAGTGA

Upstream 100 bases:

>100_bases
TGACAGGAATAAATGAGATATATATTTAAAAATGACTTATATCATTTATAGTAAGATTATCAGATTAAGCAAGAATATTT
AGTGATAGTGTGGTGATTAT

Downstream 100 bases:

>100_bases
TAGTATGGCTATAGGATTACCAAGTATCAACATATCATTTAAGGAGCTAGCTACAACTGTTAAAGAACGTTCAGCTAGAG
GAATAATTGCAATGGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIVISIKYLPKPQSKSIRMYEVS
DELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTLTLNYLDSVYEEDVVYENMEEINLNLGE

Sequences:

>Translated_147_residues
MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIVISIKYLPKPQSKSIRMYEVS
DELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTLTLNYLDSVYEEDVVYENMEEINLNLGE
>Mature_147_residues
MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIVISIKYLPKPQSKSIRMYEVS
DELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTLTLNYLDSVYEEDVVYENMEEINLNLGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17134; Mature: 17134

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIV
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEE
ISIKYLPKPQSKSIRMYEVSDELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTL
EEEEECCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEEE
TLNYLDSVYEEDVVYENMEEINLNLGE
EEHHHHHHHHHHHHHCCHHHCCEECCC
>Mature Secondary Structure
MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIV
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEE
ISIKYLPKPQSKSIRMYEVSDELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTL
EEEEECCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEEE
TLNYLDSVYEEDVVYENMEEINLNLGE
EEHHHHHHHHHHHHHCCHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA