| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is glnA [H]
Identifier: 126698942
GI number: 126698942
Start: 1559188
End: 1561086
Strand: Direct
Name: glnA [H]
Synonym: CD1343
Alternate gene names: 126698942
Gene position: 1559188-1561086 (Clockwise)
Preceding gene: 126698940
Following gene: 126698944
Centisome position: 36.34
GC content: 31.02
Gene sequence:
>1899_bases ATGGATAGTCTATTATACGTAATAGAGAAAGATAAACACACTAATGAAGAATTAAGAGAAATCCTAAAAAGCAATAAAAA TATAAGATTTGTTTCCTTAATGGGGGTTGATTTAGGAGGAAATGCAACAGATGAAAAGATTCCTGTAGAATTATTTTTGG AGGATATAGATAAATTTTTGGAATCAGCTATACAGACTGATGGTTCAAGTGTTGAGCTTTATAATATAGCTACATTAAAT AATGCGAAAGTAGATTTAATGCCAGATAAAAGTTGTCATTGGTATGTAGATTACAATATGGAATATATAGACGAAGAAGT AGGTCTACCTGTTGGAACATTAAAGATACCTGCATTTTTAATACATGATAATAAAAAAGTATGTTCTAGAGGAGTACTTC AAAAAGCAGATAAGTACTTTAAAAAGTCAATGTATGAAATATTTAGAGAATATCCACATGTAATAAATAACATAGGAATA GATTCAGTAGATGATATAGAGGAAATAATGTTAACAGCAGCTACAGAACTTGAGTTCTGGGTTAATACTCCTGAGGATAA AGCTGACTTAGAGAAATTATATGTATCACAAAGCCTAAAAGAGCAATACTGGAAAAGAACTCATGGTATTATAAGAACTT GTTTAGAGAAAAGTTTAATTATACTTCAAAAGCTAGGTGTAAACCCTGAAATGGCTCACAAAGAGGTCGGAGGAATACAA AGTTCTATTAGTATAGATGGAAGAACAAACCATGCTATGGAGCAATTAGAGGTTTCTTGGAAGTTTTCTACACCATTACA AGCAGCAGACAATGAATTATTAGTAAGAGATGTTATAGAGGATGTATTTACATCACATGGACTAGAAGTTACATTTAAAG CAAAACCAATTCATGGAGTAGCAGGAAGTGGTGGACATACACATGTAGGAGTAAGTGCGAAGTTAAAGGATGGAAGTATA AAAAATCTATTTGCTCCAAAAGATTTAAAAGAAGATTATCTAAGTGAACTAGGATATGGGGCTCTTATGGGACTTCTTTA CAATTATGAAGTATTAAACCCAATTGTAACAGCTTCTAATGATGGATTTAATAGATTAGTTCCTGGATTTGAAGCTCCTG TATGCATAGTTACATCTTTAGGGCATAGTTATGAGATTCCATCAAGAAATAGGTCAGTGCTTGTTGGATTAATAAGAGAT ATGAAAAATCCAAAGACTGTAAGATTTGAATTAAGGTCACCAAGCCCTCTATCTAACACGTATTTAGTAATAGCAGGATG TTATCAAACAATGTTGGATGGTATAAAAGCAGCAGCTAAGAGTGGTCTTAGTACAAAAGAACTTGAAAAAGAGTTATCTA AAAATGTAGGTGAAGAAAGTTTCTATTTAGAAAAAGATAGAGCATATAGAGATGAAAATGATGTATTTGAACATTATAGT TTGGAAGAAAGAAATGCAAGATTTGGAATACCACCAGCTACAGTTTATGAAAATATGAAAAACTTAGAAATATATGCTTC AAAATTAAAATCTTTAAAACAAGGTGATGTATTTACTGATAGTATAATAGAATCATTTAAGATTGGAGCTATAGATAAGT GGCAAAAGAAATTAAAAACTAGAATAATAGAGGCTGGGATTCAAAAAATAAGAAGTATTGTCAAGATACACACAAAAGAA AATATGGATGCGCTTGATGAGGTAGTTTGGAACTCAATATCGGATTTAAAGTTCAATATTATGAAGGATACTTTAACTAG AGAATCACTATTCACTAGAGTGAGAGAAGCTATAGAAAATAAGGATTACCAGACTGCTTCAGATTTACAAATAGAATTAA AGAGAAGTATGGAAGAAATACAACAACTGTATATGCAGTACAAGAAAAATATATACTAA
Upstream 100 bases:
>100_bases CGAATAATTTGCAAGAAAAATTCATAAATGTAAGGAAAATGAAATTTATCTTGTATTTAACAAAATAAAATATACATAAA AATTATGGGAGAGTGGAAAA
Downstream 100 bases:
>100_bases TATAACAATTTGATTTTGATATGATAAAGGCAATCAAGTATTATTAAACACTATGAGTAAATTCTCAAGTGTAAAAGCAT ACTTGATTGCCTTTAATTTT
Product: glutamine synthetase
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MDSLLYVIEKDKHTNEELREILKSNKNIRFVSLMGVDLGGNATDEKIPVELFLEDIDKFLESAIQTDGSSVELYNIATLN NAKVDLMPDKSCHWYVDYNMEYIDEEVGLPVGTLKIPAFLIHDNKKVCSRGVLQKADKYFKKSMYEIFREYPHVINNIGI DSVDDIEEIMLTAATELEFWVNTPEDKADLEKLYVSQSLKEQYWKRTHGIIRTCLEKSLIILQKLGVNPEMAHKEVGGIQ SSISIDGRTNHAMEQLEVSWKFSTPLQAADNELLVRDVIEDVFTSHGLEVTFKAKPIHGVAGSGGHTHVGVSAKLKDGSI KNLFAPKDLKEDYLSELGYGALMGLLYNYEVLNPIVTASNDGFNRLVPGFEAPVCIVTSLGHSYEIPSRNRSVLVGLIRD MKNPKTVRFELRSPSPLSNTYLVIAGCYQTMLDGIKAAAKSGLSTKELEKELSKNVGEESFYLEKDRAYRDENDVFEHYS LEERNARFGIPPATVYENMKNLEIYASKLKSLKQGDVFTDSIIESFKIGAIDKWQKKLKTRIIEAGIQKIRSIVKIHTKE NMDALDEVVWNSISDLKFNIMKDTLTRESLFTRVREAIENKDYQTASDLQIELKRSMEEIQQLYMQYKKNIY
Sequences:
>Translated_632_residues MDSLLYVIEKDKHTNEELREILKSNKNIRFVSLMGVDLGGNATDEKIPVELFLEDIDKFLESAIQTDGSSVELYNIATLN NAKVDLMPDKSCHWYVDYNMEYIDEEVGLPVGTLKIPAFLIHDNKKVCSRGVLQKADKYFKKSMYEIFREYPHVINNIGI DSVDDIEEIMLTAATELEFWVNTPEDKADLEKLYVSQSLKEQYWKRTHGIIRTCLEKSLIILQKLGVNPEMAHKEVGGIQ SSISIDGRTNHAMEQLEVSWKFSTPLQAADNELLVRDVIEDVFTSHGLEVTFKAKPIHGVAGSGGHTHVGVSAKLKDGSI KNLFAPKDLKEDYLSELGYGALMGLLYNYEVLNPIVTASNDGFNRLVPGFEAPVCIVTSLGHSYEIPSRNRSVLVGLIRD MKNPKTVRFELRSPSPLSNTYLVIAGCYQTMLDGIKAAAKSGLSTKELEKELSKNVGEESFYLEKDRAYRDENDVFEHYS LEERNARFGIPPATVYENMKNLEIYASKLKSLKQGDVFTDSIIESFKIGAIDKWQKKLKTRIIEAGIQKIRSIVKIHTKE NMDALDEVVWNSISDLKFNIMKDTLTRESLFTRVREAIENKDYQTASDLQIELKRSMEEIQQLYMQYKKNIY >Mature_632_residues MDSLLYVIEKDKHTNEELREILKSNKNIRFVSLMGVDLGGNATDEKIPVELFLEDIDKFLESAIQTDGSSVELYNIATLN NAKVDLMPDKSCHWYVDYNMEYIDEEVGLPVGTLKIPAFLIHDNKKVCSRGVLQKADKYFKKSMYEIFREYPHVINNIGI DSVDDIEEIMLTAATELEFWVNTPEDKADLEKLYVSQSLKEQYWKRTHGIIRTCLEKSLIILQKLGVNPEMAHKEVGGIQ SSISIDGRTNHAMEQLEVSWKFSTPLQAADNELLVRDVIEDVFTSHGLEVTFKAKPIHGVAGSGGHTHVGVSAKLKDGSI KNLFAPKDLKEDYLSELGYGALMGLLYNYEVLNPIVTASNDGFNRLVPGFEAPVCIVTSLGHSYEIPSRNRSVLVGLIRD MKNPKTVRFELRSPSPLSNTYLVIAGCYQTMLDGIKAAAKSGLSTKELEKELSKNVGEESFYLEKDRAYRDENDVFEHYS LEERNARFGIPPATVYENMKNLEIYASKLKSLKQGDVFTDSIIESFKIGAIDKWQKKLKTRIIEAGIQKIRSIVKIHTKE NMDALDEVVWNSISDLKFNIMKDTLTRESLFTRVREAIENKDYQTASDLQIELKRSMEEIQQLYMQYKKNIY
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=217, Percent_Identity=31.7972350230415, Blast_Score=92, Evalue=7e-20,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 71913; Mature: 71913
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLLYVIEKDKHTNEELREILKSNKNIRFVSLMGVDLGGNATDEKIPVELFLEDIDKFL CCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH ESAIQTDGSSVELYNIATLNNAKVDLMPDKSCHWYVDYNMEYIDEEVGLPVGTLKIPAFL HHHHHCCCCCEEEEEEEEECCCEEEECCCCCEEEEEECCHHHHHHHHCCCCCCEECCEEE IHDNKKVCSRGVLQKADKYFKKSMYEIFREYPHVINNIGIDSVDDIEEIMLTAATELEFW EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEE VNTPEDKADLEKLYVSQSLKEQYWKRTHGIIRTCLEKSLIILQKLGVNPEMAHKEVGGIQ ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC SSISIDGRTNHAMEQLEVSWKFSTPLQAADNELLVRDVIEDVFTSHGLEVTFKAKPIHGV CEEEECCCCHHHHHHHEEEEEECCCCHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC AGSGGHTHVGVSAKLKDGSIKNLFAPKDLKEDYLSELGYGALMGLLYNYEVLNPIVTASN CCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCC DGFNRLVPGFEAPVCIVTSLGHSYEIPSRNRSVLVGLIRDMKNPKTVRFELRSPSPLSNT CCCHHCCCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC YLVIAGCYQTMLDGIKAAAKSGLSTKELEKELSKNVGEESFYLEKDRAYRDENDVFEHYS EEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECHHHCCCCCHHHHHHCC LEERNARFGIPPATVYENMKNLEIYASKLKSLKQGDVFTDSIIESFKIGAIDKWQKKLKT CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHH RIIEAGIQKIRSIVKIHTKENMDALDEVVWNSISDLKFNIMKDTLTRESLFTRVREAIEN HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KDYQTASDLQIELKRSMEEIQQLYMQYKKNIY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDSLLYVIEKDKHTNEELREILKSNKNIRFVSLMGVDLGGNATDEKIPVELFLEDIDKFL CCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH ESAIQTDGSSVELYNIATLNNAKVDLMPDKSCHWYVDYNMEYIDEEVGLPVGTLKIPAFL HHHHHCCCCCEEEEEEEEECCCEEEECCCCCEEEEEECCHHHHHHHHCCCCCCEECCEEE IHDNKKVCSRGVLQKADKYFKKSMYEIFREYPHVINNIGIDSVDDIEEIMLTAATELEFW EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEE VNTPEDKADLEKLYVSQSLKEQYWKRTHGIIRTCLEKSLIILQKLGVNPEMAHKEVGGIQ ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC SSISIDGRTNHAMEQLEVSWKFSTPLQAADNELLVRDVIEDVFTSHGLEVTFKAKPIHGV CEEEECCCCHHHHHHHEEEEEECCCCHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC AGSGGHTHVGVSAKLKDGSIKNLFAPKDLKEDYLSELGYGALMGLLYNYEVLNPIVTASN CCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCC DGFNRLVPGFEAPVCIVTSLGHSYEIPSRNRSVLVGLIRDMKNPKTVRFELRSPSPLSNT CCCHHCCCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC YLVIAGCYQTMLDGIKAAAKSGLSTKELEKELSKNVGEESFYLEKDRAYRDENDVFEHYS EEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECHHHCCCCCHHHHHHCC LEERNARFGIPPATVYENMKNLEIYASKLKSLKQGDVFTDSIIESFKIGAIDKWQKKLKT CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHH RIIEAGIQKIRSIVKIHTKENMDALDEVVWNSISDLKFNIMKDTLTRESLFTRVREAIEN HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KDYQTASDLQIELKRSMEEIQQLYMQYKKNIY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]