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The map label for this gene is yizB [H]

Identifier: 126698944

GI number: 126698944

Start: 1562534

End: 1562866

Strand: Direct

Name: yizB [H]

Synonym: CD1345

Alternate gene names: 126698944

Gene position: 1562534-1562866 (Clockwise)

Preceding gene: 126698942

Following gene: 126698945

Centisome position: 36.42

GC content: 30.03

Gene sequence:

>333_bases
ATGAACACACAATTTAGAAAGGGTGTTTTAGAAATTTGTGTACTTGCTCTCATATCTAAGAAAGATATGTATGGATATGA
GATAGTACATAACATCTCTAAAGTAATAGATGTAAATGAAGGAACAATATATCCTATTCTAAGAAGACTTACAAAAGATT
TGTATTTCGAAACATATATACTAGAATCTAATGAAGGTCCTGCTAGAAAATACTATAGAATAACTTCACTAGGAAAAGAG
AATTTATCCAATCTGATGGAAGAGTGGAGAGAATTTGTAAAGGCTGTTGAGATTTTAATAAGTGAAGATGAGGGAGGTAA
TGAACTTGAATAA

Upstream 100 bases:

>100_bases
TGTGCAGAACATAGTACTGTGTTATTATGAGGATATAAGAAGTTTTAACATAGTACCTTGTAAAACACAATACTGTGTAT
TTAAAGAAAGGATGGAGTAT

Downstream 100 bases:

>100_bases
AACTGAGTTTCTTGAAATTTTAAAGGATTATCTAAAAAAAGATTTTTCTGAGAGCGAAGTTAATGATATATTGAGAGATT
ATGAAGAGTATTTCGTAGAT

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNTQFRKGVLEICVLALISKKDMYGYEIVHNISKVIDVNEGTIYPILRRLTKDLYFETYILESNEGPARKYYRITSLGKE
NLSNLMEEWREFVKAVEILISEDEGGNELE

Sequences:

>Translated_110_residues
MNTQFRKGVLEICVLALISKKDMYGYEIVHNISKVIDVNEGTIYPILRRLTKDLYFETYILESNEGPARKYYRITSLGKE
NLSNLMEEWREFVKAVEILISEDEGGNELE
>Mature_110_residues
MNTQFRKGVLEICVLALISKKDMYGYEIVHNISKVIDVNEGTIYPILRRLTKDLYFETYILESNEGPARKYYRITSLGKE
NLSNLMEEWREFVKAVEILISEDEGGNELE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12840; Mature: 12840

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQFRKGVLEICVLALISKKDMYGYEIVHNISKVIDVNEGTIYPILRRLTKDLYFETYI
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHE
LESNEGPARKYYRITSLGKENLSNLMEEWREFVKAVEILISEDEGGNELE
EECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNTQFRKGVLEICVLALISKKDMYGYEIVHNISKVIDVNEGTIYPILRRLTKDLYFETYI
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHE
LESNEGPARKYYRITSLGKENLSNLMEEWREFVKAVEILISEDEGGNELE
EECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]