| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698839
Identifier: 126698839
GI number: 126698839
Start: 1445652
End: 1446386
Strand: Direct
Name: 126698839
Synonym: CD1243
Alternate gene names: NA
Gene position: 1445652-1446386 (Clockwise)
Preceding gene: 126698838
Following gene: 126698840
Centisome position: 33.7
GC content: 23.54
Gene sequence:
>735_bases ATGTTACTAGAAAATAAAGGCTCTATATTAATAATAACATTGATAATATTTTCTATTATAAGTACTGTGTGCATTATGTG TATAGGTTTAATTTATACACATAATAATATGTTTGAGTTAGGATACAAAGACATTCAACTAAAAGAAATTTCTTTAAGTG GAATAGAAATATCAGTAAGTAATGTACTTTCTTGTGTTGAGGAAGCTATTGATGTATCTAATAATGAAGACGAATTTAGA GAATATTTCTTAGGAAATAATATGATTGAATGTATAAAAAAAATAAAAGATACATCTTATAGTAGTTTAGAAGAACTTTC TTTAAAAGTAGAAAATAATACTATTTATGACAGAGGAGATTTTTTTGAAATTGATATAGAAAGTAATGTTAGAGAAAAAG AATTTTTAAAAGCAATAAAAGTAAGAGTGAAAATCAAAAATCCATGGACAGGAATTGATATTGAAGATTATATGGATAAA TCTAATAACAATAAAATTGATGACAAAACATTCAATAATTATAAAGCATCTGAAAATAATGAAGTTCTAAATCAATTTAA AAATGAAAGTGAAAATATAAGGAATCAAGAGGTTGGTGGATTTACAGAAGAAGATGAAGAATATGAAGAAGATGAAGAAT ATGAAGAAGAACTTAAACAAAACATAATTGAAAATATAAAGAAGAATTTTGATGAAAAAAACCTAGTACAGGTATATAAG TATAGGGGTGTATAA
Upstream 100 bases:
>100_bases GAAATTAACAGTAGAATAGAGCAAATTTTAGATTATTATCAATGCTATGAAATAAATATAGAGATAAAAAATGAATTTAA AAAACTGAGGTTTAATAGCT
Downstream 100 bases:
>100_bases CTTTGAAAAAAGAAGGAATGTGACTGTAATAGAATTAATAGTATCTATCAGTATAATACTCTTGATAGTTACATTATCTT TTCCAAAAGATAATCTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MLLENKGSILIITLIIFSIISTVCIMCIGLIYTHNNMFELGYKDIQLKEISLSGIEISVSNVLSCVEEAIDVSNNEDEFR EYFLGNNMIECIKKIKDTSYSSLEELSLKVENNTIYDRGDFFEIDIESNVREKEFLKAIKVRVKIKNPWTGIDIEDYMDK SNNNKIDDKTFNNYKASENNEVLNQFKNESENIRNQEVGGFTEEDEEYEEDEEYEEELKQNIIENIKKNFDEKNLVQVYK YRGV
Sequences:
>Translated_244_residues MLLENKGSILIITLIIFSIISTVCIMCIGLIYTHNNMFELGYKDIQLKEISLSGIEISVSNVLSCVEEAIDVSNNEDEFR EYFLGNNMIECIKKIKDTSYSSLEELSLKVENNTIYDRGDFFEIDIESNVREKEFLKAIKVRVKIKNPWTGIDIEDYMDK SNNNKIDDKTFNNYKASENNEVLNQFKNESENIRNQEVGGFTEEDEEYEEDEEYEEELKQNIIENIKKNFDEKNLVQVYK YRGV >Mature_244_residues MLLENKGSILIITLIIFSIISTVCIMCIGLIYTHNNMFELGYKDIQLKEISLSGIEISVSNVLSCVEEAIDVSNNEDEFR EYFLGNNMIECIKKIKDTSYSSLEELSLKVENNTIYDRGDFFEIDIESNVREKEFLKAIKVRVKIKNPWTGIDIEDYMDK SNNNKIDDKTFNNYKASENNEVLNQFKNESENIRNQEVGGFTEEDEEYEEDEEYEEELKQNIIENIKKNFDEKNLVQVYK YRGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28553; Mature: 28553
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLENKGSILIITLIIFSIISTVCIMCIGLIYTHNNMFELGYKDIQLKEISLSGIEISVS CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCEEEEHH NVLSCVEEAIDVSNNEDEFREYFLGNNMIECIKKIKDTSYSSLEELSLKVENNTIYDRGD HHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHEEEECCCEEEECCC FFEIDIESNVREKEFLKAIKVRVKIKNPWTGIDIEDYMDKSNNNKIDDKTFNNYKASENN EEEEECCCCCCHHHHHHHHHHEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCH EVLNQFKNESENIRNQEVGGFTEEDEEYEEDEEYEEELKQNIIENIKKNFDEKNLVQVYK HHHHHHHHHHHHCCHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YRGV HCCC >Mature Secondary Structure MLLENKGSILIITLIIFSIISTVCIMCIGLIYTHNNMFELGYKDIQLKEISLSGIEISVS CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCEEEEHH NVLSCVEEAIDVSNNEDEFREYFLGNNMIECIKKIKDTSYSSLEELSLKVENNTIYDRGD HHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHEEEECCCEEEECCC FFEIDIESNVREKEFLKAIKVRVKIKNPWTGIDIEDYMDKSNNNKIDDKTFNNYKASENN EEEEECCCCCCHHHHHHHHHHEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCH EVLNQFKNESENIRNQEVGGFTEEDEEYEEDEEYEEELKQNIIENIKKNFDEKNLVQVYK HHHHHHHHHHHHCCHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YRGV HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA