Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698838

Identifier: 126698838

GI number: 126698838

Start: 1445294

End: 1445668

Strand: Direct

Name: 126698838

Synonym: CD1242

Alternate gene names: NA

Gene position: 1445294-1445668 (Clockwise)

Preceding gene: 126698836

Following gene: 126698839

Centisome position: 33.69

GC content: 21.6

Gene sequence:

>375_bases
TTGTTTTTATTATTGAAAATAAGAAAGAGTGGTTTTATATCAATCGAATGTATAATAAGTATTGCTATATTATATGTGGC
TGTTTATTTAGTTTCTACATCATTGTATAATTGTTATAGTTTTATCAGTAGAAATATATCTGACAGAGAAATGTTAAGTA
CAGCAAAAAAATATATAGAAGATGAGAAGTATAGAATACAAAATAGTAAGTATGAGTTAATTGAAGATAAGATAGAAAAA
AATTACATAAATGGATATGAAATTAACAGTAGAATAGAGCAAATTTTAGATTATTATCAATGCTATGAAATAAATATAGA
GATAAAAAATGAATTTAAAAAACTGAGGTTTAATAGCTATGTTACTAGAAAATAA

Upstream 100 bases:

>100_bases
ATGTATGGGAAGAAATTTTGATTACAATGAAAAAACTTACAAAAGATATTTACGAAAAAACTTATAGTTAAATGTTTATA
TATAAAATATTATTTAGGGG

Downstream 100 bases:

>100_bases
AGGCTCTATATTAATAATAACATTGATAATATTTTCTATTATAAGTACTGTGTGCATTATGTGTATAGGTTTAATTTATA
CACATAATAATATGTTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIEDEKYRIQNSKYELIEDKIEK
NYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSYVTRK

Sequences:

>Translated_124_residues
MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIEDEKYRIQNSKYELIEDKIEK
NYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSYVTRK
>Mature_124_residues
MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIEDEKYRIQNSKYELIEDKIEK
NYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSYVTRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14967; Mature: 14967

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
DEKYRIQNSKYELIEDKIEKNYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSY
CHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHH
VTRK
CCCC
>Mature Secondary Structure
MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
DEKYRIQNSKYELIEDKIEKNYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSY
CHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHH
VTRK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA