| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698838
Identifier: 126698838
GI number: 126698838
Start: 1445294
End: 1445668
Strand: Direct
Name: 126698838
Synonym: CD1242
Alternate gene names: NA
Gene position: 1445294-1445668 (Clockwise)
Preceding gene: 126698836
Following gene: 126698839
Centisome position: 33.69
GC content: 21.6
Gene sequence:
>375_bases TTGTTTTTATTATTGAAAATAAGAAAGAGTGGTTTTATATCAATCGAATGTATAATAAGTATTGCTATATTATATGTGGC TGTTTATTTAGTTTCTACATCATTGTATAATTGTTATAGTTTTATCAGTAGAAATATATCTGACAGAGAAATGTTAAGTA CAGCAAAAAAATATATAGAAGATGAGAAGTATAGAATACAAAATAGTAAGTATGAGTTAATTGAAGATAAGATAGAAAAA AATTACATAAATGGATATGAAATTAACAGTAGAATAGAGCAAATTTTAGATTATTATCAATGCTATGAAATAAATATAGA GATAAAAAATGAATTTAAAAAACTGAGGTTTAATAGCTATGTTACTAGAAAATAA
Upstream 100 bases:
>100_bases ATGTATGGGAAGAAATTTTGATTACAATGAAAAAACTTACAAAAGATATTTACGAAAAAACTTATAGTTAAATGTTTATA TATAAAATATTATTTAGGGG
Downstream 100 bases:
>100_bases AGGCTCTATATTAATAATAACATTGATAATATTTTCTATTATAAGTACTGTGTGCATTATGTGTATAGGTTTAATTTATA CACATAATAATATGTTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIEDEKYRIQNSKYELIEDKIEK NYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSYVTRK
Sequences:
>Translated_124_residues MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIEDEKYRIQNSKYELIEDKIEK NYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSYVTRK >Mature_124_residues MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIEDEKYRIQNSKYELIEDKIEK NYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSYVTRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14967; Mature: 14967
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIE CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC DEKYRIQNSKYELIEDKIEKNYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSY CHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHH VTRK CCCC >Mature Secondary Structure MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIE CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC DEKYRIQNSKYELIEDKIEKNYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSY CHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHH VTRK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA