Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698840

Identifier: 126698840

GI number: 126698840

Start: 1446406

End: 1446825

Strand: Direct

Name: 126698840

Synonym: CD1244

Alternate gene names: NA

Gene position: 1446406-1446825 (Clockwise)

Preceding gene: 126698839

Following gene: 126698841

Centisome position: 33.71

GC content: 26.9

Gene sequence:

>420_bases
GTGACTGTAATAGAATTAATAGTATCTATCAGTATAATACTCTTGATAGTTACATTATCTTTTCCAAAAGATAATCTTGA
AAATCATAAAATAAATTTATTTGCACGTCAACTTTGTTCAGATATAAGGTATGTTAGGCGAATTAATATGTTTAGCAACT
ACAATACATATATATATTATATAAATCAAGGTAAACACGAAGGTTATGTATTGAGAAAAGATGGTAAAAACATTAAATCA
ATAATGCTACCTAAAAATGCAAAAATAGCTAGGAGTATTGAAATAATAAAGTTTAAATCCGATGGGTCGCCTCAAAAGGC
GTCTACAATAGAGATATATAATAATAGATTAAGAAAAACTATAACAATAACACCTGTAAGTGGAAGAGTACTTCTGAAAG
AGGGAAAATATGAAACATAA

Upstream 100 bases:

>100_bases
AAACAAAACATAATTGAAAATATAAAGAAGAATTTTGATGAAAAAAACCTAGTACAGGTATATAAGTATAGGGGTGTATA
ACTTTGAAAAAAGAAGGAAT

Downstream 100 bases:

>100_bases
ATATGGTTACTTGCTTTTGGAAAGTGTAGTATCATTGTCTTCAATGGTGATAATTATACTAGTTTTATATTCTATATTTT
TGTCTACAATAAACTTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTVIELIVSISIILLIVTLSFPKDNLENHKINLFARQLCSDIRYVRRINMFSNYNTYIYYINQGKHEGYVLRKDGKNIKS
IMLPKNAKIARSIEIIKFKSDGSPQKASTIEIYNNRLRKTITITPVSGRVLLKEGKYET

Sequences:

>Translated_139_residues
MTVIELIVSISIILLIVTLSFPKDNLENHKINLFARQLCSDIRYVRRINMFSNYNTYIYYINQGKHEGYVLRKDGKNIKS
IMLPKNAKIARSIEIIKFKSDGSPQKASTIEIYNNRLRKTITITPVSGRVLLKEGKYET
>Mature_138_residues
TVIELIVSISIILLIVTLSFPKDNLENHKINLFARQLCSDIRYVRRINMFSNYNTYIYYINQGKHEGYVLRKDGKNIKSI
MLPKNAKIARSIEIIKFKSDGSPQKASTIEIYNNRLRKTITITPVSGRVLLKEGKYET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16097; Mature: 15966

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIELIVSISIILLIVTLSFPKDNLENHKINLFARQLCSDIRYVRRINMFSNYNTYIYY
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
INQGKHEGYVLRKDGKNIKSIMLPKNAKIARSIEIIKFKSDGSPQKASTIEIYNNRLRKT
EECCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCHHHEEECCCCEEE
ITITPVSGRVLLKEGKYET
EEEEECCCEEEEECCCCCC
>Mature Secondary Structure 
TVIELIVSISIILLIVTLSFPKDNLENHKINLFARQLCSDIRYVRRINMFSNYNTYIYY
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
INQGKHEGYVLRKDGKNIKSIMLPKNAKIARSIEIIKFKSDGSPQKASTIEIYNNRLRKT
EECCCCCCEEEECCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCHHHEEECCCCEEE
ITITPVSGRVLLKEGKYET
EEEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA