Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698806

Identifier: 126698806

GI number: 126698806

Start: 1409285

End: 1410151

Strand: Direct

Name: 126698806

Synonym: CD1210

Alternate gene names: NA

Gene position: 1409285-1410151 (Clockwise)

Preceding gene: 126698805

Following gene: 126698809

Centisome position: 32.85

GC content: 24.91

Gene sequence:

>867_bases
ATGAATAAAAAAGATACTATGCACTTAATTTTTACAATTGTAATTTTTATTTTATTATGGTATATTGTGGTAGCAGTAAG
TGAGATTAATAAAAATATTGAAAGTTGTAGTAACAAATTAGATTATTTGTCACAAGAGATTATGAGTACTAAATCGGATA
TTAGTAATACTATAAATGAAGAAATGTCAAAAAGTTATATAACAAAGAGTATTGACTTAAAAGTAAAAAAAATCGAGAAA
AAAGAGTGTGTTATTGATGTAGATGTTCAATTAAGTAAACTTGGAAAAAATGGAAAAGTATTTTTTATGTATAAAGAAGA
TAGTGATAAATGGAATGAAACTGAGATGACAAAACATGGAGAATTATCGTATGCATGTGAAATTAAGATAAATACAGGAA
GTGAATATGACTATAAAGTAGTTACAAGTGGAGCTATATCTGAAAGTTCTGATGTGCAAAAATTGACTAAATCTGATTAT
ATGCCTGAACAACCCATATTTAATTCTGGGATAAGAGATAATAGAGAATACTTTATTGAAATAGTAGAAAATAGTAATCT
TTTCAATCATGAGAGTGAAAAGTCAAAAAATAAAGTTTATGATAATATTAGATTAGAAAAAGTAGATATTATTGTAAATG
AAGGAAAAAAAGACACTATATACAAAGCCAAATTAGCTGAAGGCTTAGATGATGGCAAAACTAATAATTCAAATAGAAAT
CAAGTGAATTATGAAGTAAGTTTTCCTAAAAGGGATATTGATGACATAATTTATATTAAAGCTAAACTTACATACAATAA
TGGAGTAGAATATACAAAGGATATAACTGAAGATATAACTATGGGATTACAAGATTTAGAAAAATAA

Upstream 100 bases:

>100_bases
TTTAAAAATAGAAGAAAATTTGTATAAATTTGTAACTTTGAAATTTCTAAATGCTTAAGTATAATATTATTTATTAAGGT
AGTAGTGAGGGGGACATAAA

Downstream 100 bases:

>100_bases
ATACATATTTAAATAAATATTCAAATAGATTTGTTCAATAAAATAGAGTATAAATAAAACTGTAGTAGTTTTACTTATAC
TCTATTAAAAAATTATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNKKDTMHLIFTIVIFILLWYIVVAVSEINKNIESCSNKLDYLSQEIMSTKSDISNTINEEMSKSYITKSIDLKVKKIEK
KECVIDVDVQLSKLGKNGKVFFMYKEDSDKWNETEMTKHGELSYACEIKINTGSEYDYKVVTSGAISESSDVQKLTKSDY
MPEQPIFNSGIRDNREYFIEIVENSNLFNHESEKSKNKVYDNIRLEKVDIIVNEGKKDTIYKAKLAEGLDDGKTNNSNRN
QVNYEVSFPKRDIDDIIYIKAKLTYNNGVEYTKDITEDITMGLQDLEK

Sequences:

>Translated_288_residues
MNKKDTMHLIFTIVIFILLWYIVVAVSEINKNIESCSNKLDYLSQEIMSTKSDISNTINEEMSKSYITKSIDLKVKKIEK
KECVIDVDVQLSKLGKNGKVFFMYKEDSDKWNETEMTKHGELSYACEIKINTGSEYDYKVVTSGAISESSDVQKLTKSDY
MPEQPIFNSGIRDNREYFIEIVENSNLFNHESEKSKNKVYDNIRLEKVDIIVNEGKKDTIYKAKLAEGLDDGKTNNSNRN
QVNYEVSFPKRDIDDIIYIKAKLTYNNGVEYTKDITEDITMGLQDLEK
>Mature_288_residues
MNKKDTMHLIFTIVIFILLWYIVVAVSEINKNIESCSNKLDYLSQEIMSTKSDISNTINEEMSKSYITKSIDLKVKKIEK
KECVIDVDVQLSKLGKNGKVFFMYKEDSDKWNETEMTKHGELSYACEIKINTGSEYDYKVVTSGAISESSDVQKLTKSDY
MPEQPIFNSGIRDNREYFIEIVENSNLFNHESEKSKNKVYDNIRLEKVDIIVNEGKKDTIYKAKLAEGLDDGKTNNSNRN
QVNYEVSFPKRDIDDIIYIKAKLTYNNGVEYTKDITEDITMGLQDLEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33277; Mature: 33277

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKDTMHLIFTIVIFILLWYIVVAVSEINKNIESCSNKLDYLSQEIMSTKSDISNTINE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMSKSYITKSIDLKVKKIEKKECVIDVDVQLSKLGKNGKVFFMYKEDSDKWNETEMTKHG
HHHHHHHHHHHCEEEEEECCCCCEEEECEEHHHCCCCCCEEEEEECCCCCCCCCCCCCCC
ELSYACEIKINTGSEYDYKVVTSGAISESSDVQKLTKSDYMPEQPIFNSGIRDNREYFIE
CEEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
IVENSNLFNHESEKSKNKVYDNIRLEKVDIIVNEGKKDTIYKAKLAEGLDDGKTNNSNRN
EECCCCCCCCCCHHHHHHHHHCEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC
QVNYEVSFPKRDIDDIIYIKAKLTYNNGVEYTKDITEDITMGLQDLEK
EEEEEEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKKDTMHLIFTIVIFILLWYIVVAVSEINKNIESCSNKLDYLSQEIMSTKSDISNTINE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMSKSYITKSIDLKVKKIEKKECVIDVDVQLSKLGKNGKVFFMYKEDSDKWNETEMTKHG
HHHHHHHHHHHCEEEEEECCCCCEEEECEEHHHCCCCCCEEEEEECCCCCCCCCCCCCCC
ELSYACEIKINTGSEYDYKVVTSGAISESSDVQKLTKSDYMPEQPIFNSGIRDNREYFIE
CEEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
IVENSNLFNHESEKSKNKVYDNIRLEKVDIIVNEGKKDTIYKAKLAEGLDDGKTNNSNRN
EECCCCCCCCCCHHHHHHHHHCEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC
QVNYEVSFPKRDIDDIIYIKAKLTYNNGVEYTKDITEDITMGLQDLEK
EEEEEEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA