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The map label for this gene is recN [H]

Identifier: 126698805

GI number: 126698805

Start: 1407392

End: 1409071

Strand: Direct

Name: recN [H]

Synonym: CD1209

Alternate gene names: 126698805

Gene position: 1407392-1409071 (Clockwise)

Preceding gene: 126698804

Following gene: 126698806

Centisome position: 32.8

GC content: 28.04

Gene sequence:

>1680_bases
TTGATCCTCGAATTATATATGAAAAATTGTGCCTTAGTTGAAGAACTAAGGTTGAATATTGATAAAAACTTAAATATACT
TACAGGTGAAACTGGTTCAGGAAAATCTATAATAATAGATGCACTTGGACTTTGTTTAGGTGATAAATATGATAGGTCTT
TTTTAAGAAAAGGAACAGATAAGGGACTTGTTGAGGCTGTATTTTTTTCAGACAATAGATATCTTAAAAAAATATTAGAA
GAAAATGATATAAGTATGGAAGATGATAATTTATTGGTAATAACTAGGCTGATATACTCAGATGGTAAGAGTACTGCTAG
AGTAAATGGAAGGACTGTTAAAGTGTCTCTTCTTAAAGAAATTGCATCTACACTTATAGATATACATGGTCAACATCAAA
ATCAAGCTTTGTTTAATAAAGATACTCATTTAAAATTTCTAGACCTTTTTGGAGAAAATGAATTGGAAGAGTTTAAAATT
GCTTATAAAAAGGTGTACCATAAGTATAGTGAAGTAAAAAAAGCTTTAAATTGCTTGACAGAAAATAAAGATGAGATGCA
AATTCAACGAGAAATAGATTTATTAAGATTTCAAATAAATGAAATTGAAGCTGCAAATCTAAATAAGAATGAATATGAAG
ATTTATTAAAACAAAGAGAAGTTTATAGAAATAGTGAAAAGATATATAATAATCTAAATTCGAGTTATAGCAAGTTACAT
AATGGTGAGTATAATGTTATTGACCTAATAGGTCTTGCATCTAAGGAACTTAATGACATATCTAAATATGACAGTGTTTT
AAGTGAATATAGTGATACTGTAGAAAGAATCATGTATGAGTTACAAGACATATCTGGTGAGATAAGAAATTACAAAGATA
ATATAGACTTTGAACCTTATGAGCTAGAGCAGATTGAGCTTAGAATCGACGAGATTAATAACTTAAGAAGAAAATATGGA
GACAGTATAGATGATATATTTGAGTATTATGGAAAAATTAAAGATAGATTAGATGAAATATTAAATAGAGATGAAAGAGT
TGAACAGTTAAGAAGCAAACTGATGAATATAGAAGAAGATTTAAAAATAAAAGCCAGTAAATTGACTAAAGCAAGAATAG
AAGTAGCAACTACTTTAGAAAAAATACTTCTTGATGAATTAAAAAGCTTAAATATGAAAAATGTAATGTTCAAGGTTAAT
TTTGAAAAAGGTCCATTTACTTTAGATGGAGTAGATGATATTGAATTTATGATATCTTTTAACTTAGGAGAAGATATTAA
GCCTATATATAAAGTTGCATCAGGTGGTGAGATGTCCAGATTTATGTTAGCGTTTAAAACCATATTGGCTGATATAGATG
ATATTGATACATTAGTGTTTGACGAGATAGATACTGGAATAAGTGGGATAGCAGCACAGATAGTTGGTGAGAAATTGAGT
GATATAGCAAAGAAAAAACAGATAATATGTATAACTCATTTACCTCAAATTGCTGCAAATGCAGACACTCATTATTGTAT
AGAGAAAGATACTTCAAATAATAGGACGTTTACCAATGTTAGTAAGTTAAATGAATCTCAACGAAAAAATGAAATTGCCA
GACTTATAGCAGGTAACAATATAACAGAAAAAACTATTGAACATGCAAGTGAAATTATTGAGTTGGCTAAAAAATGTTAG

Upstream 100 bases:

>100_bases
GAAGGATATGAATTTGATGGTGAGACATACAATAACAAAATAGTAGAAGTTGTTGAAGCTTCTCATAATTTAGACAAATA
GGTTAAAAGGGGGCTTAGAT

Downstream 100 bases:

>100_bases
TGAAAAACAAGCATTTTAATAGGTGTAAAGAATTTTTATAGAAATGCTTTACATCTATTTTTTATGATGAAATTATTTTA
AAATATCTAGTGCCTATATT

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MILELYMKNCALVEELRLNIDKNLNILTGETGSGKSIIIDALGLCLGDKYDRSFLRKGTDKGLVEAVFFSDNRYLKKILE
ENDISMEDDNLLVITRLIYSDGKSTARVNGRTVKVSLLKEIASTLIDIHGQHQNQALFNKDTHLKFLDLFGENELEEFKI
AYKKVYHKYSEVKKALNCLTENKDEMQIQREIDLLRFQINEIEAANLNKNEYEDLLKQREVYRNSEKIYNNLNSSYSKLH
NGEYNVIDLIGLASKELNDISKYDSVLSEYSDTVERIMYELQDISGEIRNYKDNIDFEPYELEQIELRIDEINNLRRKYG
DSIDDIFEYYGKIKDRLDEILNRDERVEQLRSKLMNIEEDLKIKASKLTKARIEVATTLEKILLDELKSLNMKNVMFKVN
FEKGPFTLDGVDDIEFMISFNLGEDIKPIYKVASGGEMSRFMLAFKTILADIDDIDTLVFDEIDTGISGIAAQIVGEKLS
DIAKKKQIICITHLPQIAANADTHYCIEKDTSNNRTFTNVSKLNESQRKNEIARLIAGNNITEKTIEHASEIIELAKKC

Sequences:

>Translated_559_residues
MILELYMKNCALVEELRLNIDKNLNILTGETGSGKSIIIDALGLCLGDKYDRSFLRKGTDKGLVEAVFFSDNRYLKKILE
ENDISMEDDNLLVITRLIYSDGKSTARVNGRTVKVSLLKEIASTLIDIHGQHQNQALFNKDTHLKFLDLFGENELEEFKI
AYKKVYHKYSEVKKALNCLTENKDEMQIQREIDLLRFQINEIEAANLNKNEYEDLLKQREVYRNSEKIYNNLNSSYSKLH
NGEYNVIDLIGLASKELNDISKYDSVLSEYSDTVERIMYELQDISGEIRNYKDNIDFEPYELEQIELRIDEINNLRRKYG
DSIDDIFEYYGKIKDRLDEILNRDERVEQLRSKLMNIEEDLKIKASKLTKARIEVATTLEKILLDELKSLNMKNVMFKVN
FEKGPFTLDGVDDIEFMISFNLGEDIKPIYKVASGGEMSRFMLAFKTILADIDDIDTLVFDEIDTGISGIAAQIVGEKLS
DIAKKKQIICITHLPQIAANADTHYCIEKDTSNNRTFTNVSKLNESQRKNEIARLIAGNNITEKTIEHASEIIELAKKC
>Mature_559_residues
MILELYMKNCALVEELRLNIDKNLNILTGETGSGKSIIIDALGLCLGDKYDRSFLRKGTDKGLVEAVFFSDNRYLKKILE
ENDISMEDDNLLVITRLIYSDGKSTARVNGRTVKVSLLKEIASTLIDIHGQHQNQALFNKDTHLKFLDLFGENELEEFKI
AYKKVYHKYSEVKKALNCLTENKDEMQIQREIDLLRFQINEIEAANLNKNEYEDLLKQREVYRNSEKIYNNLNSSYSKLH
NGEYNVIDLIGLASKELNDISKYDSVLSEYSDTVERIMYELQDISGEIRNYKDNIDFEPYELEQIELRIDEINNLRRKYG
DSIDDIFEYYGKIKDRLDEILNRDERVEQLRSKLMNIEEDLKIKASKLTKARIEVATTLEKILLDELKSLNMKNVMFKVN
FEKGPFTLDGVDDIEFMISFNLGEDIKPIYKVASGGEMSRFMLAFKTILADIDDIDTLVFDEIDTGISGIAAQIVGEKLS
DIAKKKQIICITHLPQIAANADTHYCIEKDTSNNRTFTNVSKLNESQRKNEIARLIAGNNITEKTIEHASEIIELAKKC

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=562, Percent_Identity=32.5622775800712, Blast_Score=298, Evalue=4e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 64391; Mature: 64391

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILELYMKNCALVEELRLNIDKNLNILTGETGSGKSIIIDALGLCLGDKYDRSFLRKGTD
CCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHCCCC
KGLVEAVFFSDNRYLKKILEENDISMEDDNLLVITRLIYSDGKSTARVNGRTVKVSLLKE
CCCEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCCCCEEECCCEEHHHHHHH
IASTLIDIHGQHQNQALFNKDTHLKFLDLFGENELEEFKIAYKKVYHKYSEVKKALNCLT
HHHHHHHHCCCCCCCHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENKDEMQIQREIDLLRFQINEIEAANLNKNEYEDLLKQREVYRNSEKIYNNLNSSYSKLH
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NGEYNVIDLIGLASKELNDISKYDSVLSEYSDTVERIMYELQDISGEIRNYKDNIDFEPY
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ELEQIELRIDEINNLRRKYGDSIDDIFEYYGKIKDRLDEILNRDERVEQLRSKLMNIEED
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
LKIKASKLTKARIEVATTLEKILLDELKSLNMKNVMFKVNFEKGPFTLDGVDDIEFMISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCCEEEEEEE
NLGEDIKPIYKVASGGEMSRFMLAFKTILADIDDIDTLVFDEIDTGISGIAAQIVGEKLS
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DIAKKKQIICITHLPQIAANADTHYCIEKDTSNNRTFTNVSKLNESQRKNEIARLIAGNN
HHHHCCCEEEEECCCHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
ITEKTIEHASEIIELAKKC
CHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILELYMKNCALVEELRLNIDKNLNILTGETGSGKSIIIDALGLCLGDKYDRSFLRKGTD
CCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHCCCC
KGLVEAVFFSDNRYLKKILEENDISMEDDNLLVITRLIYSDGKSTARVNGRTVKVSLLKE
CCCEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCCCCEEECCCEEHHHHHHH
IASTLIDIHGQHQNQALFNKDTHLKFLDLFGENELEEFKIAYKKVYHKYSEVKKALNCLT
HHHHHHHHCCCCCCCHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENKDEMQIQREIDLLRFQINEIEAANLNKNEYEDLLKQREVYRNSEKIYNNLNSSYSKLH
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NGEYNVIDLIGLASKELNDISKYDSVLSEYSDTVERIMYELQDISGEIRNYKDNIDFEPY
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ELEQIELRIDEINNLRRKYGDSIDDIFEYYGKIKDRLDEILNRDERVEQLRSKLMNIEED
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
LKIKASKLTKARIEVATTLEKILLDELKSLNMKNVMFKVNFEKGPFTLDGVDDIEFMISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCCEEEEEEE
NLGEDIKPIYKVASGGEMSRFMLAFKTILADIDDIDTLVFDEIDTGISGIAAQIVGEKLS
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DIAKKKQIICITHLPQIAANADTHYCIEKDTSNNRTFTNVSKLNESQRKNEIARLIAGNN
HHHHCCCEEEEECCCHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
ITEKTIEHASEIIELAKKC
CHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]