| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is divIVB [H]
Identifier: 126698745
GI number: 126698745
Start: 1349385
End: 1350182
Strand: Direct
Name: divIVB [H]
Synonym: CD1150
Alternate gene names: 126698745
Gene position: 1349385-1350182 (Clockwise)
Preceding gene: 126698744
Following gene: 126698746
Centisome position: 31.45
GC content: 33.46
Gene sequence:
>798_bases ATGAGCGAAGTTATAGTTATAACATCTGGTAAAGGTGGGGTTGGAAAAACTACTACCGCAGCAAACTTAGGAACTGCGCT AAGCCTAGAAAATAAAAAAACAGTAGTTGTGGATGCAGATATTGGACTTAGAAACTTAGATGTAGTAATGGGTCTTGAAA ATCGAATAGTTTATGACATAGTAGATGTAGTTGAAGGAACTTGTAGGCTTAAGCAAGCTCTAATAAAAGACAAAAGATTT GATAATCTATATTTATTACCAGCAGCACAAACTAGAGATAAAAATGCTGTCTCAGTTGAGCAGATGATTGACCTGTGTGA GAAACTAAAAGAATCTTTCGAGTATATAATAATAGATTGTCCAGCAGGTATTGAGCAAGGCTTTAAAAATGCAGTAGCTG GGGCAGATAGAGCTATTGTAGTTACTAATCCAGAAATATCAGCAGTAAGAGATGCTGATAGAATAATAGGTCTATTAGAA GCAAATGAAATAAAAGAGATAAGATTAGTTATAAATAGAATTAGAAATGATATGGTTAAGCGTGGAGACATGATGGATAA ACAAGATATAATAGAAATATTAGCAATAGATTTGTTAGGTCTTGTTCCTGATGATGAAAGCATAATTATATCAACAAATA AAGGAGAGCCAGCTATACTTGATTCTAAGTCACTTGCTGGTCAAGCATACAAAAATATCGCAAAAAGGATACTAAATGAA GAAGTTCCTCTACTTGATCTTGAAGTTGAAGATGGATTCTTTGGTAGACTTAAAAAAATGTTTAGCATGGCTAAGTAG
Upstream 100 bases:
>100_bases AAATTAGCCCAGAAATAGCCTTTGTAAGTAATGGAAGAATTGTAATCGAAAGCTATTTGTCAAAGTTAGACAAATAGAAA GAAAAATAGGGGGTAGTATT
Downstream 100 bases:
>100_bases CAAAGGAGGATACATCTGTGTTAGATTTATTTAGAGTTTTTTCTAACGAGGCTAAAACTAGTAAATCTGTTGCTAAAGAG AGGTTAAAGCTAGTTTTAGT
Product: septum site-determining protein
Products: NA
Alternate protein names: Cell division inhibitor minD [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSEVIVITSGKGGVGKTTTAANLGTALSLENKKTVVVDADIGLRNLDVVMGLENRIVYDIVDVVEGTCRLKQALIKDKRF DNLYLLPAAQTRDKNAVSVEQMIDLCEKLKESFEYIIIDCPAGIEQGFKNAVAGADRAIVVTNPEISAVRDADRIIGLLE ANEIKEIRLVINRIRNDMVKRGDMMDKQDIIEILAIDLLGLVPDDESIIISTNKGEPAILDSKSLAGQAYKNIAKRILNE EVPLLDLEVEDGFFGRLKKMFSMAK
Sequences:
>Translated_265_residues MSEVIVITSGKGGVGKTTTAANLGTALSLENKKTVVVDADIGLRNLDVVMGLENRIVYDIVDVVEGTCRLKQALIKDKRF DNLYLLPAAQTRDKNAVSVEQMIDLCEKLKESFEYIIIDCPAGIEQGFKNAVAGADRAIVVTNPEISAVRDADRIIGLLE ANEIKEIRLVINRIRNDMVKRGDMMDKQDIIEILAIDLLGLVPDDESIIISTNKGEPAILDSKSLAGQAYKNIAKRILNE EVPLLDLEVEDGFFGRLKKMFSMAK >Mature_264_residues SEVIVITSGKGGVGKTTTAANLGTALSLENKKTVVVDADIGLRNLDVVMGLENRIVYDIVDVVEGTCRLKQALIKDKRFD NLYLLPAAQTRDKNAVSVEQMIDLCEKLKESFEYIIIDCPAGIEQGFKNAVAGADRAIVVTNPEISAVRDADRIIGLLEA NEIKEIRLVINRIRNDMVKRGDMMDKQDIIEILAIDLLGLVPDDESIIISTNKGEPAILDSKSLAGQAYKNIAKRILNEE VPLLDLEVEDGFFGRLKKMFSMAK
Specific function: ATPase required for the correct placement of the division site. Cell division inhibitors minC and minD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to desta
COG id: COG2894
COG function: function code D; Septum formation inhibitor-activating ATPase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family. MinD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787423, Length=271, Percent_Identity=49.8154981549816, Blast_Score=258, Evalue=2e-70,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010223 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29146; Mature: 29015
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVIVITSGKGGVGKTTTAANLGTALSLENKKTVVVDADIGLRNLDVVMGLENRIVYDI CCCEEEEECCCCCCCCCCCHHHCCCEEEECCCEEEEEECCCCCCCCCEEECCCCHHHHHH VDVVEGTCRLKQALIKDKRFDNLYLLPAAQTRDKNAVSVEQMIDLCEKLKESFEYIIIDC HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC PAGIEQGFKNAVAGADRAIVVTNPEISAVRDADRIIGLLEANEIKEIRLVINRIRNDMVK CCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHH RGDMMDKQDIIEILAIDLLGLVPDDESIIISTNKGEPAILDSKSLAGQAYKNIAKRILNE HCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCC EVPLLDLEVEDGFFGRLKKMFSMAK CCCEEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure SEVIVITSGKGGVGKTTTAANLGTALSLENKKTVVVDADIGLRNLDVVMGLENRIVYDI CCEEEEECCCCCCCCCCCHHHCCCEEEECCCEEEEEECCCCCCCCCEEECCCCHHHHHH VDVVEGTCRLKQALIKDKRFDNLYLLPAAQTRDKNAVSVEQMIDLCEKLKESFEYIIIDC HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC PAGIEQGFKNAVAGADRAIVVTNPEISAVRDADRIIGLLEANEIKEIRLVINRIRNDMVK CCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHH RGDMMDKQDIIEILAIDLLGLVPDDESIIISTNKGEPAILDSKSLAGQAYKNIAKRILNE HCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCC EVPLLDLEVEDGFFGRLKKMFSMAK CCCEEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1400225; 8459776; 1400224; 9384377 [H]