| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is minE
Identifier: 126698746
GI number: 126698746
Start: 1350200
End: 1350484
Strand: Direct
Name: minE
Synonym: CD1151
Alternate gene names: 126698746
Gene position: 1350200-1350484 (Clockwise)
Preceding gene: 126698745
Following gene: 126698747
Centisome position: 31.47
GC content: 29.82
Gene sequence:
>285_bases GTGTTAGATTTATTTAGAGTTTTTTCTAACGAGGCTAAAACTAGTAAATCTGTTGCTAAAGAGAGGTTAAAGCTAGTTTT AGTTCATGATAGAGTAGATTGTTCACCACAACTTTTAGAGATGATAAAAACAGACATTTTAAAAGTAATAGCTAATTATG CAGAAATAGAAGATGATGGTCTTGAAATAAAAATGTCTAAATGCAGAGGTGAGCATGATGACAAACCTGTATCTGCATTA GTTGCTAATATACCACTAAAGAATATAAAAGATAGATGTATGTAA
Upstream 100 bases:
>100_bases ATGAAGAAGTTCCTCTACTTGATCTTGAAGTTGAAGATGGATTCTTTGGTAGACTTAAAAAAATGTTTAGCATGGCTAAG TAGCAAAGGAGGATACATCT
Downstream 100 bases:
>100_bases TTAGTGCTTAAAAGGGGGATATCCTTATTGGTATATGCCCCTTTTATTTAATTATATGTTTAAAGATAGAAAGACGGTGA TTCTTTGAAAAAAATCAATA
Product: cell division topological specificity factor MinE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MLDLFRVFSNEAKTSKSVAKERLKLVLVHDRVDCSPQLLEMIKTDILKVIANYAEIEDDGLEIKMSKCRGEHDDKPVSAL VANIPLKNIKDRCM
Sequences:
>Translated_94_residues MLDLFRVFSNEAKTSKSVAKERLKLVLVHDRVDCSPQLLEMIKTDILKVIANYAEIEDDGLEIKMSKCRGEHDDKPVSAL VANIPLKNIKDRCM >Mature_94_residues MLDLFRVFSNEAKTSKSVAKERLKLVLVHDRVDCSPQLLEMIKTDILKVIANYAEIEDDGLEIKMSKCRGEHDDKPVSAL VANIPLKNIKDRCM
Specific function: Prevents the cell division inhibition by proteins minC and minD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the l
COG id: COG0851
COG function: function code D; Septum formation topological specificity factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MINE_CLOD6 (Q18B11)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001087643.1 - STRING: Q18B11 - GeneID: 4914587 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1151 - NMPDR: fig|1496.1.peg.245 - eggNOG: COG0851 - HOGENOM: HBG449956 - OMA: QMRREIL - ProtClustDB: PRK13987 - HAMAP: MF_00262 - InterPro: IPR005527 - TIGRFAMs: TIGR01215
Pfam domain/function: PF03776 MinE
EC number: NA
Molecular weight: Translated: 10686; Mature: 10686
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLFRVFSNEAKTSKSVAKERLKLVLVHDRVDCSPQLLEMIKTDILKVIANYAEIEDDG CCHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC LEIKMSKCRGEHDDKPVSALVANIPLKNIKDRCM CEEEHHHHCCCCCCCHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MLDLFRVFSNEAKTSKSVAKERLKLVLVHDRVDCSPQLLEMIKTDILKVIANYAEIEDDG CCHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC LEIKMSKCRGEHDDKPVSALVANIPLKNIKDRCM CEEEHHHHCCCCCCCHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA