| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is minC
Identifier: 126698744
GI number: 126698744
Start: 1348678
End: 1349361
Strand: Direct
Name: minC
Synonym: CD1149
Alternate gene names: 126698744
Gene position: 1348678-1349361 (Clockwise)
Preceding gene: 126698743
Following gene: 126698745
Centisome position: 31.44
GC content: 30.41
Gene sequence:
>684_bases ATGTCTTTAAGAGAAATTTGTAGTCAAGAACTAGTAGAGTTCAAGGGTAATAAAAGAGGGATAATAGTAAATATAAAAAG AGAAGCTCCATTTGAGGAAATACAGGAAAAAATAATAAACAAATTGGAAGCATATGTTGGCTTTTTTAATGGGGCTAAAA TTAGTAAAATTAATAGTGATTGTTTAACTGACATGGAGATTCTAGAACTTAAAGAAGGAATTACTTCTAGATTTGATGTG GAATTTGTTGAAGATCAAAAAATTGAAGAAAATAGTAATTTTCCAACAAAATATGTCAATACCCTAAGATCTGGTGAAAA TATTGAATTTGAAGGTGATGTAGTTATATTGAATGATATGAAACCTGGTTCAAAAGTCCTTTCAAAATCAAATACAGTTG TTATGGGAGATATAAATGCTGGTGCTAAGGTTGTAGCAGGAGGTAATGTTTTTGTAATGGGTAAAATAGAAGGTTTTGTA CATGCAGGTGCAGAAGGCAATGAATTTGCATATGTTGTTGCTGGAAATCTTAATCCTAAAATATTACAAATAGCAGATAA TATTGCAGAAGCTCCAGATGATGAAGAAAATTATGAAAGTGAATCAGAAATTAGCCCAGAAATAGCCTTTGTAAGTAATG GAAGAATTGTAATCGAAAGCTATTTGTCAAAGTTAGACAAATAG
Upstream 100 bases:
>100_bases TAGCTCAATCTATGTATAAACTTTAGCTTTATATAGAAAAAATAAAAGGGTTTAAAGCGTATTTGAAGAATATAAATGAT ATATCACTCTGGAGGTTGTT
Downstream 100 bases:
>100_bases AAAGAAAAATAGGGGGTAGTATTATGAGCGAAGTTATAGTTATAACATCTGGTAAAGGTGGGGTTGGAAAAACTACTACC GCAGCAAACTTAGGAACTGC
Product: septum site-determining protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSDCLTDMEILELKEGITSRFDV EFVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDMKPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFV HAGAEGNEFAYVVAGNLNPKILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK
Sequences:
>Translated_227_residues MSLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSDCLTDMEILELKEGITSRFDV EFVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDMKPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFV HAGAEGNEFAYVVAGNLNPKILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK >Mature_226_residues SLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSDCLTDMEILELKEGITSRFDVE FVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDMKPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFVH AGAEGNEFAYVVAGNLNPKILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK
Specific function: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize ftsZ filaments that have formed before they mature into polar Z rings. Prevents ftsZ polymerization
COG id: COG0850
COG function: function code D; Septum formation inhibitor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minC family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MINC_CLOD6 (Q18B13)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001087641.1 - ProteinModelPortal: Q18B13 - SMR: Q18B13 - STRING: Q18B13 - GeneID: 4914585 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1149 - NMPDR: fig|1496.1.peg.247 - eggNOG: COG0850 - HOGENOM: HBG399077 - OMA: CVAAFYL - ProtClustDB: CLSK2534706 - HAMAP: MF_00267 - InterPro: IPR016098 - InterPro: IPR013033 - InterPro: IPR005526 - Gene3D: G3DSA:2.160.20.70 - TIGRFAMs: TIGR01222
Pfam domain/function: PF03775 MinC_C; SSF63848 MinC_C
EC number: NA
Molecular weight: Translated: 25095; Mature: 24963
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSD CCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCH CLTDMEILELKEGITSRFDVEFVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDM HHCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEECCCEEEEECC KPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFVHAGAEGNEFAYVVAGNLNPK CCCHHHHCCCCEEEEEECCCCCEEEECCCEEEEEEECEEEECCCCCCEEEEEEECCCCCH ILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK HHEEHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHCC >Mature Secondary Structure SLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSD CHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCH CLTDMEILELKEGITSRFDVEFVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDM HHCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEECCCEEEEECC KPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFVHAGAEGNEFAYVVAGNLNPK CCCHHHHCCCCEEEEEECCCCCEEEECCCEEEEEEECEEEECCCCCCEEEEEEECCCCCH ILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK HHEEHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA