| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is gutA [H]
Identifier: 126698344
GI number: 126698344
Start: 937075
End: 937635
Strand: Direct
Name: gutA [H]
Synonym: CD0764
Alternate gene names: 126698344
Gene position: 937075-937635 (Clockwise)
Preceding gene: 126698343
Following gene: 126698345
Centisome position: 21.84
GC content: 31.91
Gene sequence:
>561_bases ATGACGCAATTTTTTCAAGTATTAGCAAGTGGTGCAGATAGTTTTATGAATTTATTTAGGGCAGGTGGGCAACAATTTGT AGGTTTTGTAACAGATATAGTACCACTTTTAGTAGCATTATTAGTTACAATGAATGCAATTATCAACTTTATTGGTACAG ATAGAGTCGAGAGACTTGCAAAAAAATGTTCTGCAAATATATTTACTAGATATTTGATATTACCAGTCCTTGGTACATTT GTATTTGCAAACCCAATGACACTATCATTAGGAAGATTCTTGCCAGAAAAGTTTAAACCTAGTTACTTTGCAGCAGCAAG CTTTTCATGCCATACAATGAATGGATTATTCCCACATATCAATCCAGGTGAACTATTTATATATCTAGGAATTGCAAATG GTATAACAACTTTGGGATTCTCAACAGCAGATTTAGCAGTTAGATATTTGTTAGTGGGTATAGTTGCAAACTTTATTAAA GGTGTAGTTACTGACTATACAACAAAATTTGTAGAGAAACAACAAGGAATAGCATTAAATTCAGATATAAAGATTGGATA A
Upstream 100 bases:
>100_bases TTTGAGAAAAATAAATGTGAAGATACAAATAATCTGAGTACTGATGAAGAGTGTAGGATGGAAGTAGTTTAAAAAAATAT ATTTATAAGGAGGAGTTAAT
Downstream 100 bases:
>100_bases TTACTTTAAGGTATAAATAAATTTTTCAAATAAAAAAATAGTGTATAGAGGAGGATAAATTATATGGCATTTAACAAAGT TAAAATAGTAAAAGGTTCTG
Product: PTS system glucitol/sorbitol-specific transporter subunit IIc2
Products: D-sorbitol 6-phosphate [Cytoplasm]; pyruvate [C]
Alternate protein names: EIIC-Gut; PTS system glucitol/sorbitol-specific EIIC component [H]
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTQFFQVLASGADSFMNLFRAGGQQFVGFVTDIVPLLVALLVTMNAIINFIGTDRVERLAKKCSANIFTRYLILPVLGTF VFANPMTLSLGRFLPEKFKPSYFAAASFSCHTMNGLFPHINPGELFIYLGIANGITTLGFSTADLAVRYLLVGIVANFIK GVVTDYTTKFVEKQQGIALNSDIKIG
Sequences:
>Translated_186_residues MTQFFQVLASGADSFMNLFRAGGQQFVGFVTDIVPLLVALLVTMNAIINFIGTDRVERLAKKCSANIFTRYLILPVLGTF VFANPMTLSLGRFLPEKFKPSYFAAASFSCHTMNGLFPHINPGELFIYLGIANGITTLGFSTADLAVRYLLVGIVANFIK GVVTDYTTKFVEKQQGIALNSDIKIG >Mature_185_residues TQFFQVLASGADSFMNLFRAGGQQFVGFVTDIVPLLVALLVTMNAIINFIGTDRVERLAKKCSANIFTRYLILPVLGTFV FANPMTLSLGRFLPEKFKPSYFAAASFSCHTMNGLFPHINPGELFIYLGIANGITTLGFSTADLAVRYLLVGIVANFIKG VVTDYTTKFVEKQQGIALNSDIKIG
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3730
COG function: function code G; Phosphotransferase system sorbitol-specific component IIC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI48994904, Length=180, Percent_Identity=61.6666666666667, Blast_Score=246, Evalue=9e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004699 [H]
Pfam domain/function: PF03608 EII-GUT [H]
EC number: NA
Molecular weight: Translated: 20336; Mature: 20205
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS51107 PTS_EIIC_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFFQVLASGADSFMNLFRAGGQQFVGFVTDIVPLLVALLVTMNAIINFIGTDRVERLA CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH KKCSANIFTRYLILPVLGTFVFANPMTLSLGRFLPEKFKPSYFAAASFSCHTMNGLFPHI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCHHHHCCCCHHHCCCCCCCC NPGELFIYLGIANGITTLGFSTADLAVRYLLVGIVANFIKGVVTDYTTKFVEKQQGIALN CCCCEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC SDIKIG CCCCCC >Mature Secondary Structure TQFFQVLASGADSFMNLFRAGGQQFVGFVTDIVPLLVALLVTMNAIINFIGTDRVERLA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH KKCSANIFTRYLILPVLGTFVFANPMTLSLGRFLPEKFKPSYFAAASFSCHTMNGLFPHI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCHHHHCCCCHHHCCCCCCCC NPGELFIYLGIANGITTLGFSTADLAVRYLLVGIVANFIKGVVTDYTTKFVEKQQGIALN CCCCEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC SDIKIG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoenolpyruvate; sorbitol [Periplasm] [C]
Specific reaction: phosphoenolpyruvate + sorbitol [Periplasm] = D-sorbitol 6-phosphate [Cytoplasm] + pyruvate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9435786 [H]