| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is gutM [C]
Identifier: 126698343
GI number: 126698343
Start: 936612
End: 937046
Strand: Direct
Name: gutM [C]
Synonym: CD0763
Alternate gene names: 126698343
Gene position: 936612-937046 (Clockwise)
Preceding gene: 126698342
Following gene: 126698344
Centisome position: 21.83
GC content: 29.2
Gene sequence:
>435_bases ATGGACCCAGTAATTTTTATTATAGCATCACTTATTACAGTGTATTTATTAAATATTTTTCTTGGATACTTACAGCTTAA AGATTTTAATAAAAATTATATTGAACTAAAAAGAAAAGGAAGAGTGGCAATTGGCAGAAAAAAAGGAAGAATTTCATCGG GTACAATTGTGTTGATACTTATAAATGATGATGGTGTGATTGTCGAGACTAGAAAAATGCAAGGTGTTACAGTATTGGCA AGAGTAAAGTCATTTGAAGGTTTGGTAGGAAAGAGCTTAGAGTATATAGAAAAATCAGATTTAACTGTTTACAATAAACT ACTTAAAAAAGCAATACTAGATGCAGTCAAACAGTACATAACATTTGAGAAAAATAAATGTGAAGATACAAATAATCTGA GTACTGATGAAGAGTGTAGGATGGAAGTAGTTTAA
Upstream 100 bases:
>100_bases GTACTTGAAGTAGGGAGAGATAAAAAGATGGTAGAAGAACTTGCTAAGGTAAAATCATTTGATGAATTTTATAAAATAAT TACCAAGAGGAGGTAATAAT
Downstream 100 bases:
>100_bases AAAAATATATTTATAAGGAGGAGTTAATATGACGCAATTTTTTCAAGTATTAGCAAGTGGTGCAGATAGTTTTATGAATT TATTTAGGGCAGGTGGGCAA
Product: glucitol operon activator protein
Products: NA
Alternate protein names: Glucitol Operon Activator; Glucitol Operon Activator Protein; Transcriptional Regulator SrlR; Glucitol/Sorbitol Operon Activator; Truncated ORF Glucitol / Sorbitol Operon Activator
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MDPVIFIIASLITVYLLNIFLGYLQLKDFNKNYIELKRKGRVAIGRKKGRISSGTIVLILINDDGVIVETRKMQGVTVLA RVKSFEGLVGKSLEYIEKSDLTVYNKLLKKAILDAVKQYITFEKNKCEDTNNLSTDEECRMEVV
Sequences:
>Translated_144_residues MDPVIFIIASLITVYLLNIFLGYLQLKDFNKNYIELKRKGRVAIGRKKGRISSGTIVLILINDDGVIVETRKMQGVTVLA RVKSFEGLVGKSLEYIEKSDLTVYNKLLKKAILDAVKQYITFEKNKCEDTNNLSTDEECRMEVV >Mature_144_residues MDPVIFIIASLITVYLLNIFLGYLQLKDFNKNYIELKRKGRVAIGRKKGRISSGTIVLILINDDGVIVETRKMQGVTVLA RVKSFEGLVGKSLEYIEKSDLTVYNKLLKKAILDAVKQYITFEKNKCEDTNNLSTDEECRMEVV
Specific function: Positive Regulator For Glucitol Operon Expression. [C]
COG id: COG4578
COG function: function code K; Glucitol operon activator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16380; Mature: 16380
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPVIFIIASLITVYLLNIFLGYLQLKDFNKNYIELKRKGRVAIGRKKGRISSGTIVLIL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEE INDDGVIVETRKMQGVTVLARVKSFEGLVGKSLEYIEKSDLTVYNKLLKKAILDAVKQYI ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TFEKNKCEDTNNLSTDEECRMEVV HCCCCCCCCCCCCCCCHHCEEECC >Mature Secondary Structure MDPVIFIIASLITVYLLNIFLGYLQLKDFNKNYIELKRKGRVAIGRKKGRISSGTIVLIL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEE INDDGVIVETRKMQGVTVLARVKSFEGLVGKSLEYIEKSDLTVYNKLLKKAILDAVKQYI ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TFEKNKCEDTNNLSTDEECRMEVV HCCCCCCCCCCCCCCCHHCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA