The gene/protein map for NC_005861 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126698291

Identifier: 126698291

GI number: 126698291

Start: 870253

End: 871176

Strand: Direct

Name: 126698291

Synonym: CD0712

Alternate gene names: NA

Gene position: 870253-871176 (Clockwise)

Preceding gene: 126698290

Following gene: 126698292

Centisome position: 20.28

GC content: 23.05

Gene sequence:

>924_bases
ATGAATGACGAATTACTAAAAAAAGTCTACACATCTTCTTTTAGTAGTGCAAGTAGGGCTCTTAAAGATTTAACTATAAT
AAATACAAAATCCTTAATAGATGATAAAACGCAAAGATGTGTGTATATAGACGAAAATAGACTAAGAGATGAACTTATTT
ACTATAGATTTTATGGAGAAAAAATAGGAAATATCAATTTTTTAAATATTTTATTACCACTAATTTTATCAAATACTAAT
ATTCAAAAAAGTGAAGATGAGGTTATTAAACTAATAAAAAAGTATGTTATTTATTTTAAAAAAGAAGAACTTTTATTTGA
TTATTTATTAGGTTCTGTAGTGTATAATTCCATTATGCACAATCTTATAAATAATAGTAAAATAGAGTATGTCGAATTAC
TACAGAGTATTAAAGACAAGATAATAGGATTTTCTATAGAATTAGACAAATCAGATGTTGTAAAGTTTCAGATGGCAAGG
ATTAAAGCAATACAATTAATTGATAAGTACATTGATTTGAAATCTGAAGATTATGATGAAGAAAGTATTTTATTAAATGT
TTTAAATGTTCTATATGATGTATATATGGAAGATAGAACTGTAGAAAATGAAGGAATTAATAGCATAAAAAAATCTATAT
TATCCATTTTGGGTGAAGATAGTAAATTAAATGAAGATAATATAGATTTTATTTTTTCTATGTCCGAATATGTTGTTAAA
TTGAGAAAATATAAAATTGGAGTTAAGGCATATAATAAAAGCATAGACCCAAGAAGTCTTATAAGACTTGAAGAAGGTAA
TACTATAGTAGACCCTATATTTAATCAAATAACAGTTATGTCGAAAACCTTTAATGATAATATATTAAGCATAAAAATAA
ATTCTAAATCAGGTATTTATATATTAAAGTTTAAAAAGGTTTAG

Upstream 100 bases:

>100_bases
ACACTACTATCCCCCTATATATGACAGCTTCTTAAACGGGCTGTCTCTTTTTTTTTAATAACAATTTATTTACATTCAAT
TTTTCAGAAAGGATATATTT

Downstream 100 bases:

>100_bases
GTTATTAGAGTGTGCTATTTTTTTCTAGATAATCTAAAAAATCTTTTTCCTTAGTGTCAGTTAAAAAACATAATTCCTTT
ACTATATTATTCCTAAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MNDELLKKVYTSSFSSASRALKDLTIINTKSLIDDKTQRCVYIDENRLRDELIYYRFYGEKIGNINFLNILLPLILSNTN
IQKSEDEVIKLIKKYVIYFKKEELLFDYLLGSVVYNSIMHNLINNSKIEYVELLQSIKDKIIGFSIELDKSDVVKFQMAR
IKAIQLIDKYIDLKSEDYDEESILLNVLNVLYDVYMEDRTVENEGINSIKKSILSILGEDSKLNEDNIDFIFSMSEYVVK
LRKYKIGVKAYNKSIDPRSLIRLEEGNTIVDPIFNQITVMSKTFNDNILSIKINSKSGIYILKFKKV

Sequences:

>Translated_307_residues
MNDELLKKVYTSSFSSASRALKDLTIINTKSLIDDKTQRCVYIDENRLRDELIYYRFYGEKIGNINFLNILLPLILSNTN
IQKSEDEVIKLIKKYVIYFKKEELLFDYLLGSVVYNSIMHNLINNSKIEYVELLQSIKDKIIGFSIELDKSDVVKFQMAR
IKAIQLIDKYIDLKSEDYDEESILLNVLNVLYDVYMEDRTVENEGINSIKKSILSILGEDSKLNEDNIDFIFSMSEYVVK
LRKYKIGVKAYNKSIDPRSLIRLEEGNTIVDPIFNQITVMSKTFNDNILSIKINSKSGIYILKFKKV
>Mature_307_residues
MNDELLKKVYTSSFSSASRALKDLTIINTKSLIDDKTQRCVYIDENRLRDELIYYRFYGEKIGNINFLNILLPLILSNTN
IQKSEDEVIKLIKKYVIYFKKEELLFDYLLGSVVYNSIMHNLINNSKIEYVELLQSIKDKIIGFSIELDKSDVVKFQMAR
IKAIQLIDKYIDLKSEDYDEESILLNVLNVLYDVYMEDRTVENEGINSIKKSILSILGEDSKLNEDNIDFIFSMSEYVVK
LRKYKIGVKAYNKSIDPRSLIRLEEGNTIVDPIFNQITVMSKTFNDNILSIKINSKSGIYILKFKKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35769; Mature: 35769

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDELLKKVYTSSFSSASRALKDLTIINTKSLIDDKTQRCVYIDENRLRDELIYYRFYGE
CCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCEEEEECCHHHHHHHEEEEEECC
KIGNINFLNILLPLILSNTNIQKSEDEVIKLIKKYVIYFKKEELLFDYLLGSVVYNSIMH
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLINNSKIEYVELLQSIKDKIIGFSIELDKSDVVKFQMARIKAIQLIDKYIDLKSEDYDE
HHHCCCCHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ESILLNVLNVLYDVYMEDRTVENEGINSIKKSILSILGEDSKLNEDNIDFIFSMSEYVVK
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHH
LRKYKIGVKAYNKSIDPRSLIRLEEGNTIVDPIFNQITVMSKTFNDNILSIKINSKSGIY
HHHHHCCHHHHCCCCCHHHEEEECCCCEEHHHHHHHHHHHHEECCCCEEEEEECCCCCEE
ILKFKKV
EEEEECC
>Mature Secondary Structure
MNDELLKKVYTSSFSSASRALKDLTIINTKSLIDDKTQRCVYIDENRLRDELIYYRFYGE
CCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCEEEEECCHHHHHHHEEEEEECC
KIGNINFLNILLPLILSNTNIQKSEDEVIKLIKKYVIYFKKEELLFDYLLGSVVYNSIMH
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLINNSKIEYVELLQSIKDKIIGFSIELDKSDVVKFQMARIKAIQLIDKYIDLKSEDYDE
HHHCCCCHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ESILLNVLNVLYDVYMEDRTVENEGINSIKKSILSILGEDSKLNEDNIDFIFSMSEYVVK
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHH
LRKYKIGVKAYNKSIDPRSLIRLEEGNTIVDPIFNQITVMSKTFNDNILSIKINSKSGIY
HHHHHCCHHHHCCCCCHHHEEEECCCCEEHHHHHHHHHHHHEECCCCEEEEEECCCCCEE
ILKFKKV
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA