Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is mmlH [H]

Identifier: 126698260

GI number: 126698260

Start: 824262

End: 825527

Strand: Direct

Name: mmlH [H]

Synonym: CD0681

Alternate gene names: 126698260

Gene position: 824262-825527 (Clockwise)

Preceding gene: 126698259

Following gene: 126698261

Centisome position: 19.21

GC content: 33.1

Gene sequence:

>1266_bases
ATGAAAACAACGGTTGAAATAGAAAATGATATCATATTAGGAAAAGACTATTCAAACCTAAAAAGAGGAATTGCATTTTT
TTCAATTGCTTTAATATACTTTTTTTATTGCTACAATTTTATGGTGGGTACTTTTATTAAACCAACAATGATTTATGCTT
TAGCAGATGGGGGATTTGGTTTTTCATTAAAACAAACAGAAGAAATATTTGCAGTTATGTCTTTTGGTACAATTCCAGGT
ACATTTATTTTTGGGGTGATTTCTACAAAAATTGGGAAGAAGAGGACTTTAATTAGCGTTGCTTTACTGATTGGATTGAC
AACATTTATACCAATGTTATCTCCTACAAATATTATGTTATGGAAAATAGCACGTTTGTGTACAGGAGTAGTGTTGGGAG
GCGTATTTGGAACAGCTATGCCTTTAGTTGCAGATATGTTTCCAAGTAAATATCGTGGTAAGTTAGCTGCTATATTAACT
GCTTTATTTTCATTAGCAATGATTTTTGGTGGGAAAGTATATGGCGTTTTAGGTGATGCAAATTGGCAAATATTGATGTA
TACTGCGATTATACCACCTATAGTTGGAGCTATCTTAGCAATCTTCTTTGTGCCAGATGATTTGGAGTATACAAAGGAAT
TAGTTAAAAAGGGAAAAGAAACTGGTGAAAAGATTAGCTATATAAGTATGTATAAGGGAAAATACTTATGGATTGGATTG
GGAACGATTCTTTTATCAGGTGCAAATTTTACAGCATATTCAGCATTTTCAAATAATGCAACTACATACCTAGTGACAGG
AATAGGAATGTCAGCAGCAGTGGCTGGGTCTATATATAGTTTACAAGGAATTGGTCAATTAGTAGGATATTTATTCTGGG
GTTCAATTGCAGATAAATTTGGAAGAAAAATACCTTTTATAGGTATGGCATTAGCAGCAGTATTTGTTTTTATATATACA
AAATTAGGTGGAGATAATACAACAACATTCTATATGATATCAGTATTACTAGGTGTTGCTGTTGGATATTCTGGAGCATG
GGGAGCATACTACACAGAGTTGTTCCCAAGTAAATATCGTTCGTTGTCATCTGGTATGTCATTTAATGGAGGAAGGATTA
TATCTACGTTTGCAATACCTGCTATAGCTGGTACAGCTTCTGGTACTTTAGGTATGATGACTATCTTTTACATATCAATC
GCAGTCTTTGTAGCAGGTGCTATTGTATGGTTATTCTTACCGGAGACGTTAAATAATAAAAAATAA

Upstream 100 bases:

>100_bases
TATTGCTTTATAAAATTTAAGTGGGGAATGTATATGAAAAATAGATGTTTAAACTTTTAGCAAAATTATGACTAAATTTA
AAAGGGGGAATTATAAAAAT

Downstream 100 bases:

>100_bases
AATACTAGGAATTTATTTTGTTACTTAGAAAGGGGTGGCTTATGATTTCATCAATTGATGTATGTATTATAATAGGATAT
TTGCTATTAATGTTAGTTAT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKTTVEIENDIILGKDYSNLKRGIAFFSIALIYFFYCYNFMVGTFIKPTMIYALADGGFGFSLKQTEEIFAVMSFGTIPG
TFIFGVISTKIGKKRTLISVALLIGLTTFIPMLSPTNIMLWKIARLCTGVVLGGVFGTAMPLVADMFPSKYRGKLAAILT
ALFSLAMIFGGKVYGVLGDANWQILMYTAIIPPIVGAILAIFFVPDDLEYTKELVKKGKETGEKISYISMYKGKYLWIGL
GTILLSGANFTAYSAFSNNATTYLVTGIGMSAAVAGSIYSLQGIGQLVGYLFWGSIADKFGRKIPFIGMALAAVFVFIYT
KLGGDNTTTFYMISVLLGVAVGYSGAWGAYYTELFPSKYRSLSSGMSFNGGRIISTFAIPAIAGTASGTLGMMTIFYISI
AVFVAGAIVWLFLPETLNNKK

Sequences:

>Translated_421_residues
MKTTVEIENDIILGKDYSNLKRGIAFFSIALIYFFYCYNFMVGTFIKPTMIYALADGGFGFSLKQTEEIFAVMSFGTIPG
TFIFGVISTKIGKKRTLISVALLIGLTTFIPMLSPTNIMLWKIARLCTGVVLGGVFGTAMPLVADMFPSKYRGKLAAILT
ALFSLAMIFGGKVYGVLGDANWQILMYTAIIPPIVGAILAIFFVPDDLEYTKELVKKGKETGEKISYISMYKGKYLWIGL
GTILLSGANFTAYSAFSNNATTYLVTGIGMSAAVAGSIYSLQGIGQLVGYLFWGSIADKFGRKIPFIGMALAAVFVFIYT
KLGGDNTTTFYMISVLLGVAVGYSGAWGAYYTELFPSKYRSLSSGMSFNGGRIISTFAIPAIAGTASGTLGMMTIFYISI
AVFVAGAIVWLFLPETLNNKK
>Mature_421_residues
MKTTVEIENDIILGKDYSNLKRGIAFFSIALIYFFYCYNFMVGTFIKPTMIYALADGGFGFSLKQTEEIFAVMSFGTIPG
TFIFGVISTKIGKKRTLISVALLIGLTTFIPMLSPTNIMLWKIARLCTGVVLGGVFGTAMPLVADMFPSKYRGKLAAILT
ALFSLAMIFGGKVYGVLGDANWQILMYTAIIPPIVGAILAIFFVPDDLEYTKELVKKGKETGEKISYISMYKGKYLWIGL
GTILLSGANFTAYSAFSNNATTYLVTGIGMSAAVAGSIYSLQGIGQLVGYLFWGSIADKFGRKIPFIGMALAAVFVFIYT
KLGGDNTTTFYMISVLLGVAVGYSGAWGAYYTELFPSKYRSLSSGMSFNGGRIISTFAIPAIAGTASGTLGMMTIFYISI
AVFVAGAIVWLFLPETLNNKK

Specific function: Probable uptake of 4-methylmuconolactone [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082404, Length=397, Percent_Identity=21.6624685138539, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45546; Mature: 45546

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTVEIENDIILGKDYSNLKRGIAFFSIALIYFFYCYNFMVGTFIKPTMIYALADGGFG
CCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
FSLKQTEEIFAVMSFGTIPGTFIFGVISTKIGKKRTLISVALLIGLTTFIPMLSPTNIML
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
WKIARLCTGVVLGGVFGTAMPLVADMFPSKYRGKLAAILTALFSLAMIFGGKVYGVLGDA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
NWQILMYTAIIPPIVGAILAIFFVPDDLEYTKELVKKGKETGEKISYISMYKGKYLWIGL
CCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEHEEEECCCEEEEEH
GTILLSGANFTAYSAFSNNATTYLVTGIGMSAAVAGSIYSLQGIGQLVGYLFWGSIADKF
HHHHCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRKIPFIGMALAAVFVFIYTKLGGDNTTTFYMISVLLGVAVGYSGAWGAYYTELFPSKYR
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SLSSGMSFNGGRIISTFAIPAIAGTASGTLGMMTIFYISIAVFVAGAIVWLFLPETLNNK
HHHCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
K
C
>Mature Secondary Structure
MKTTVEIENDIILGKDYSNLKRGIAFFSIALIYFFYCYNFMVGTFIKPTMIYALADGGFG
CCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
FSLKQTEEIFAVMSFGTIPGTFIFGVISTKIGKKRTLISVALLIGLTTFIPMLSPTNIML
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
WKIARLCTGVVLGGVFGTAMPLVADMFPSKYRGKLAAILTALFSLAMIFGGKVYGVLGDA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
NWQILMYTAIIPPIVGAILAIFFVPDDLEYTKELVKKGKETGEKISYISMYKGKYLWIGL
CCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEHEEEECCCEEEEEH
GTILLSGANFTAYSAFSNNATTYLVTGIGMSAAVAGSIYSLQGIGQLVGYLFWGSIADKF
HHHHCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRKIPFIGMALAAVFVFIYTKLGGDNTTTFYMISVLLGVAVGYSGAWGAYYTELFPSKYR
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SLSSGMSFNGGRIISTFAIPAIAGTASGTLGMMTIFYISIAVFVAGAIVWLFLPETLNNK
HHHCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9461415 [H]