Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698259

Identifier: 126698259

GI number: 126698259

Start: 822691

End: 824118

Strand: Direct

Name: 126698259

Synonym: CD0680

Alternate gene names: NA

Gene position: 822691-824118 (Clockwise)

Preceding gene: 126698258

Following gene: 126698260

Centisome position: 19.18

GC content: 29.69

Gene sequence:

>1428_bases
GTGGCATCTACCAACAAAAATAATGTAACAAGTAAAGAGGAAGAAAAAGAAGTTTCTACAAGTGGGCTTGAATCATGTAC
GGTTAAAGAAAACAAAGCTAAAATGAATCAAACTAATTTTAGTAATATAAATGAAAATCAAACAAATGAGAATAAAACGA
ACACATATAAAAGAAATATAGATAAAGGAAATATAGATAAAGGGAATATAGATAAAACAAACACAAATAAATCCGACATA
AATAAAGTTAACATAGATACAGTGGATACAGATAAATTAAATACAAATACTCTTACTGAAAAAAATAAAAAAGTTATATT
TAAGGGGGAAGATAATATGTCATCTACAAAAATTTACTATGGAGATTCATTAGAAGTAACGCCTGTTGGAGTAATGGATT
ACAATGATTTTTCAAAACAGACAAAAAGGGAACAGGAAATACCTGGATTTGATTCTAAGTATAGAGATTTTGTAGATTAT
ATTATGAAGATTACACATAATATCTGGGAAGAAAAAGGTATAGGTGTTATTTATGATACATATCACAATAATGTTACAAT
GCATTGTGGCTCTTCAAATTTAGTTGGTATTAAAGATGTTATTTCCAATACTCTTCAAACATTACATGCGTTTCCTGATA
GAAGATTAATTGGTCAAAATGTAATATGGTCTAACTTTGGTGCTGATGGTTTTTTATCTTCTCACCGTGTTTTGTCTACA
GCAACTAACTTAGGTGATAGTAATTTTGGACCAGCAACAGGTAGAAAAATAAACTTTAGAACTGTAATTGATTGTGCCAC
AACTAACAATAGAATCCACGAAGAATGGTTGGTTAGAGATAATTTATGGATTGTTACTCAATTAGGATTAAACCCTCAGG
AAGTAGCAAAGAGTATGGCAAAGGCAAGTGAATCTAAAGTGCTTAGTTTACAATCAACTTATGGTATCTGTGAATCTATG
GATGGTCAATTTATGCCAACTAAGTATCAAGCAAAAGATGATTCTGTTGGCGAAATGATGCTTGAAATGACAAGCCGTAT
TTATAATTATAAATATATAAATGAAGTTAAAAAATACTATCATGATAATGCAGTAGTACATTTTATATGTGATAAAGATT
TAAATGGTTATGATGAGATTCAAGGAATGATTGTAAGTTTACTTGCATCAATTCCAAATGGAAGTTATGAAGTGGAAAGA
GTAACTTGTAATCAAAGAGAAAAAAATGAAGGTTATGATGTATCTGTAAGATGGAGATTACGTGGAATAAATGAAGGTAT
AGGATTTTTTGGACAGCCTTCTGGAAAGCATATAGAAGTAATGGGAATCAATCATTATCATATACTACAAGGTAAAGTAA
AGGAGGAGTGGATAACTTTTGATGGTATGGATGTATTAAAACAAATGTATATGGGAGTAGAAGAATAA

Upstream 100 bases:

>100_bases
TATTGGTTGAAACAACAAGGGCTTGATATTCTTGAGAGAACTAAAAGTATTTTTAATGCTTAGTTATGCATACGTATTCT
GAAATAAAGGGGGATATAAA

Downstream 100 bases:

>100_bases
AGCTGTTTAGAGTATAAATAGTTTTGAAATGTATATAGGGAAGTATTGCTTTATAAAATTTAAGTGGGGAATGTATATGA
AAAATAGATGTTTAAACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MASTNKNNVTSKEEEKEVSTSGLESCTVKENKAKMNQTNFSNINENQTNENKTNTYKRNIDKGNIDKGNIDKTNTNKSDI
NKVNIDTVDTDKLNTNTLTEKNKKVIFKGEDNMSSTKIYYGDSLEVTPVGVMDYNDFSKQTKREQEIPGFDSKYRDFVDY
IMKITHNIWEEKGIGVIYDTYHNNVTMHCGSSNLVGIKDVISNTLQTLHAFPDRRLIGQNVIWSNFGADGFLSSHRVLST
ATNLGDSNFGPATGRKINFRTVIDCATTNNRIHEEWLVRDNLWIVTQLGLNPQEVAKSMAKASESKVLSLQSTYGICESM
DGQFMPTKYQAKDDSVGEMMLEMTSRIYNYKYINEVKKYYHDNAVVHFICDKDLNGYDEIQGMIVSLLASIPNGSYEVER
VTCNQREKNEGYDVSVRWRLRGINEGIGFFGQPSGKHIEVMGINHYHILQGKVKEEWITFDGMDVLKQMYMGVEE

Sequences:

>Translated_475_residues
MASTNKNNVTSKEEEKEVSTSGLESCTVKENKAKMNQTNFSNINENQTNENKTNTYKRNIDKGNIDKGNIDKTNTNKSDI
NKVNIDTVDTDKLNTNTLTEKNKKVIFKGEDNMSSTKIYYGDSLEVTPVGVMDYNDFSKQTKREQEIPGFDSKYRDFVDY
IMKITHNIWEEKGIGVIYDTYHNNVTMHCGSSNLVGIKDVISNTLQTLHAFPDRRLIGQNVIWSNFGADGFLSSHRVLST
ATNLGDSNFGPATGRKINFRTVIDCATTNNRIHEEWLVRDNLWIVTQLGLNPQEVAKSMAKASESKVLSLQSTYGICESM
DGQFMPTKYQAKDDSVGEMMLEMTSRIYNYKYINEVKKYYHDNAVVHFICDKDLNGYDEIQGMIVSLLASIPNGSYEVER
VTCNQREKNEGYDVSVRWRLRGINEGIGFFGQPSGKHIEVMGINHYHILQGKVKEEWITFDGMDVLKQMYMGVEE
>Mature_474_residues
ASTNKNNVTSKEEEKEVSTSGLESCTVKENKAKMNQTNFSNINENQTNENKTNTYKRNIDKGNIDKGNIDKTNTNKSDIN
KVNIDTVDTDKLNTNTLTEKNKKVIFKGEDNMSSTKIYYGDSLEVTPVGVMDYNDFSKQTKREQEIPGFDSKYRDFVDYI
MKITHNIWEEKGIGVIYDTYHNNVTMHCGSSNLVGIKDVISNTLQTLHAFPDRRLIGQNVIWSNFGADGFLSSHRVLSTA
TNLGDSNFGPATGRKINFRTVIDCATTNNRIHEEWLVRDNLWIVTQLGLNPQEVAKSMAKASESKVLSLQSTYGICESMD
GQFMPTKYQAKDDSVGEMMLEMTSRIYNYKYINEVKKYYHDNAVVHFICDKDLNGYDEIQGMIVSLLASIPNGSYEVERV
TCNQREKNEGYDVSVRWRLRGINEGIGFFGQPSGKHIEVMGINHYHILQGKVKEEWITFDGMDVLKQMYMGVEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54061; Mature: 53930

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTNKNNVTSKEEEKEVSTSGLESCTVKENKAKMNQTNFSNINENQTNENKTNTYKRNI
CCCCCCCCCCCCHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCC
DKGNIDKGNIDKTNTNKSDINKVNIDTVDTDKLNTNTLTEKNKKVIFKGEDNMSSTKIYY
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
GDSLEVTPVGVMDYNDFSKQTKREQEIPGFDSKYRDFVDYIMKITHNIWEEKGIGVIYDT
CCCEEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
YHNNVTMHCGSSNLVGIKDVISNTLQTLHAFPDRRLIGQNVIWSNFGADGFLSSHRVLST
CCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHCCCCEEECCCCCCCCCCCHHHHH
ATNLGDSNFGPATGRKINFRTVIDCATTNNRIHEEWLVRDNLWIVTQLGLNPQEVAKSMA
HHCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHEEECCEEEEEECCCCHHHHHHHHH
KASESKVLSLQSTYGICESMDGQFMPTKYQAKDDSVGEMMLEMTSRIYNYKYINEVKKYY
HCCHHHEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
HDNAVVHFICDKDLNGYDEIQGMIVSLLASIPNGSYEVERVTCNQREKNEGYDVSVRWRL
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEE
RGINEGIGFFGQPSGKHIEVMGINHYHILQGKVKEEWITFDGMDVLKQMYMGVEE
EECCCCCCCCCCCCCCEEEEEECCEEEEECCCHHHHEEEECCHHHHHHHHCCCCC
>Mature Secondary Structure 
ASTNKNNVTSKEEEKEVSTSGLESCTVKENKAKMNQTNFSNINENQTNENKTNTYKRNI
CCCCCCCCCCCHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCC
DKGNIDKGNIDKTNTNKSDINKVNIDTVDTDKLNTNTLTEKNKKVIFKGEDNMSSTKIYY
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
GDSLEVTPVGVMDYNDFSKQTKREQEIPGFDSKYRDFVDYIMKITHNIWEEKGIGVIYDT
CCCEEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
YHNNVTMHCGSSNLVGIKDVISNTLQTLHAFPDRRLIGQNVIWSNFGADGFLSSHRVLST
CCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHCCCCEEECCCCCCCCCCCHHHHH
ATNLGDSNFGPATGRKINFRTVIDCATTNNRIHEEWLVRDNLWIVTQLGLNPQEVAKSMA
HHCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHEEECCEEEEEECCCCHHHHHHHHH
KASESKVLSLQSTYGICESMDGQFMPTKYQAKDDSVGEMMLEMTSRIYNYKYINEVKKYY
HCCHHHEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
HDNAVVHFICDKDLNGYDEIQGMIVSLLASIPNGSYEVERVTCNQREKNEGYDVSVRWRL
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEE
RGINEGIGFFGQPSGKHIEVMGINHYHILQGKVKEEWITFDGMDVLKQMYMGVEE
EECCCCCCCCCCCCCCEEEEEECCEEEEECCCHHHHEEEECCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA