| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is sglT [H]
Identifier: 126698261
GI number: 126698261
Start: 825569
End: 827167
Strand: Direct
Name: sglT [H]
Synonym: CD0682
Alternate gene names: 126698261
Gene position: 825569-827167 (Clockwise)
Preceding gene: 126698260
Following gene: 126698262
Centisome position: 19.24
GC content: 28.77
Gene sequence:
>1599_bases ATGATTTCATCAATTGATGTATGTATTATAATAGGATATTTGCTATTAATGTTAGTTATTGGTTATTATTCAGGAAAAGA TAATAAAAATCAAGAAGATTATTTCTTGGCAGGTAGGTCAATGCCATGGATTCCAATTGCTTTATCAGTTGCAGCTACTA TGATTAGTGCAAATGGCTTTATAGGTGGTCCTGGATGGGCATATGTAGATGGAATGTATCCAGTAATGGTTAATATTACA GTACCTTTAGCAATATTTTTTGCACTGAGCATTACCACCCCAGTTATCTATAAATTAAAAATAACCTCTATATATGAATA TATGGGACTTCGTTTAGGAAATTATTCAAGAGGATTAACTATTATTCAATTTTTTATTAATTCATTGATTCAAGTTAGTT CTATGGTATATATTCCAGTGCTTATTATTCAAATGATTACTGGCTGGTCACTTTATGCTTTAGTCCCAATAGTTGTACTT GTATCAATTATATACACTCTATTAGGTGGGATTAAGGCAGTTATATGGACTGATAGTATTCAAATGATAGTAGTAATAAG TGCTGTATTTATAGTAATTATTGTAGCCTTAAAAGGAATGAATCTAAGTTTCTTTGATACATTACAAATTGCACAACAGA GTGGAAAATTAAATACATTTGATTTCAGTAGGGATATTTCAGTGACAAATACTTTTTGGGCTACTTTAATTGGTGGAACT GTAATGTGGATAAGATACTTTTGTTTTGACCAATCTCAAGTACAAAGAGTTTTAACATCTAAATCTTTAAAATGTGCAAA AAATTCTTTTGTAGTTAGTGCATTTGTTATGAATTTAGTTTACTACTTTATGCTATTGGTAGGAGTAATTTTATTTGTTT TTTATGGGGGAAGGTCATTTGAAACTTCAAATGAAATAATGATTACTTTTATTTTAAATGAACTTCCAGTAGGAGCCATT GGAATTATTATTGCAGGTGTGTTTGCAGCAGCAATGTCTAGTATCGACTCTATATTAAACAGTATGACAACTGTTTTTAC GAAGGATATTTATGAGTTTTATTTCAAAAAAGATAACAAAGAATCATCATTAAAAGTTACAATGATTATAACTGTAGTTA TAGGAGTTGTTATGACAGGTTTTATTATTATGGGATTTGGAGGAAGCATCAAATCAATTCTTGACCTTGTTGGTAACTAT ATCTCATACTTTGCTGGTCCAGCTACAGGTGCATTTGTACTAGCAATGTTTACATATAAAGCTAATGATAAAGGAGTATC TATTGGTTTTATTGTAGGGTTAGTTTTAGGATTTTTTATTTCTAATAAATATAATGTGAGTTGGTTGTGGAATCCAGCAA TAGGTGCTACAATAACATTGATATTTGGATATATTTTTAGTGTAATTTTAAAGAAAAATCATAATGTAGATGATATTAAA AAATACACTGCATTTGGTATGAGAAATCACCTTATTTCTCAAGGAATGGATAAAGTAGATGGAGTATCTATAGTGCCATT TTCTTTAGGTAAACAAGAACTAATTGTATTAGCTTTTTTTATTATCCAATATATTATATTATTTTTGATACAATTTTAA
Upstream 100 bases:
>100_bases TTGTAGCAGGTGCTATTGTATGGTTATTCTTACCGGAGACGTTAAATAATAAAAAATAAAATACTAGGAATTTATTTTGT TACTTAGAAAGGGGTGGCTT
Downstream 100 bases:
>100_bases GAAGAAATACTAGATATTTAAGGAGAAATACTAAATGAATCAAAAGAAAGTTCATTATAATAAATCGGCTACCTCAAAAG ATGTTGCAAGATTGGCAGGA
Product: sodium:solute symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MISSIDVCIIIGYLLLMLVIGYYSGKDNKNQEDYFLAGRSMPWIPIALSVAATMISANGFIGGPGWAYVDGMYPVMVNIT VPLAIFFALSITTPVIYKLKITSIYEYMGLRLGNYSRGLTIIQFFINSLIQVSSMVYIPVLIIQMITGWSLYALVPIVVL VSIIYTLLGGIKAVIWTDSIQMIVVISAVFIVIIVALKGMNLSFFDTLQIAQQSGKLNTFDFSRDISVTNTFWATLIGGT VMWIRYFCFDQSQVQRVLTSKSLKCAKNSFVVSAFVMNLVYYFMLLVGVILFVFYGGRSFETSNEIMITFILNELPVGAI GIIIAGVFAAAMSSIDSILNSMTTVFTKDIYEFYFKKDNKESSLKVTMIITVVIGVVMTGFIIMGFGGSIKSILDLVGNY ISYFAGPATGAFVLAMFTYKANDKGVSIGFIVGLVLGFFISNKYNVSWLWNPAIGATITLIFGYIFSVILKKNHNVDDIK KYTAFGMRNHLISQGMDKVDGVSIVPFSLGKQELIVLAFFIIQYIILFLIQF
Sequences:
>Translated_532_residues MISSIDVCIIIGYLLLMLVIGYYSGKDNKNQEDYFLAGRSMPWIPIALSVAATMISANGFIGGPGWAYVDGMYPVMVNIT VPLAIFFALSITTPVIYKLKITSIYEYMGLRLGNYSRGLTIIQFFINSLIQVSSMVYIPVLIIQMITGWSLYALVPIVVL VSIIYTLLGGIKAVIWTDSIQMIVVISAVFIVIIVALKGMNLSFFDTLQIAQQSGKLNTFDFSRDISVTNTFWATLIGGT VMWIRYFCFDQSQVQRVLTSKSLKCAKNSFVVSAFVMNLVYYFMLLVGVILFVFYGGRSFETSNEIMITFILNELPVGAI GIIIAGVFAAAMSSIDSILNSMTTVFTKDIYEFYFKKDNKESSLKVTMIITVVIGVVMTGFIIMGFGGSIKSILDLVGNY ISYFAGPATGAFVLAMFTYKANDKGVSIGFIVGLVLGFFISNKYNVSWLWNPAIGATITLIFGYIFSVILKKNHNVDDIK KYTAFGMRNHLISQGMDKVDGVSIVPFSLGKQELIVLAFFIIQYIILFLIQF >Mature_532_residues MISSIDVCIIIGYLLLMLVIGYYSGKDNKNQEDYFLAGRSMPWIPIALSVAATMISANGFIGGPGWAYVDGMYPVMVNIT VPLAIFFALSITTPVIYKLKITSIYEYMGLRLGNYSRGLTIIQFFINSLIQVSSMVYIPVLIIQMITGWSLYALVPIVVL VSIIYTLLGGIKAVIWTDSIQMIVVISAVFIVIIVALKGMNLSFFDTLQIAQQSGKLNTFDFSRDISVTNTFWATLIGGT VMWIRYFCFDQSQVQRVLTSKSLKCAKNSFVVSAFVMNLVYYFMLLVGVILFVFYGGRSFETSNEIMITFILNELPVGAI GIIIAGVFAAAMSSIDSILNSMTTVFTKDIYEFYFKKDNKESSLKVTMIITVVIGVVMTGFIIMGFGGSIKSILDLVGNY ISYFAGPATGAFVLAMFTYKANDKGVSIGFIVGLVLGFFISNKYNVSWLWNPAIGATITLIFGYIFSVILKKNHNVDDIK KYTAFGMRNHLISQGMDKVDGVSIVPFSLGKQELIVLAFFIIQYIILFLIQF
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI167466278, Length=450, Percent_Identity=28.8888888888889, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI256985183, Length=436, Percent_Identity=28.8990825688073, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI4507035, Length=415, Percent_Identity=26.5060240963855, Blast_Score=163, Evalue=5e-40, Organism=Homo sapiens, GI157671931, Length=427, Percent_Identity=25.9953161592506, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI14140236, Length=478, Percent_Identity=25.3138075313808, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI110835708, Length=488, Percent_Identity=25.8196721311475, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI206597483, Length=438, Percent_Identity=25.5707762557078, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI206597487, Length=468, Percent_Identity=24.7863247863248, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI4507033, Length=461, Percent_Identity=25.5965292841649, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI109659836, Length=469, Percent_Identity=25.7995735607676, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI109659839, Length=485, Percent_Identity=24.9484536082474, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI4507031, Length=467, Percent_Identity=23.5546038543897, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI17941285, Length=461, Percent_Identity=24.7288503253796, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI11141885, Length=394, Percent_Identity=25.1269035532995, Blast_Score=72, Evalue=9e-13, Organism=Escherichia coli, GI1790113, Length=385, Percent_Identity=25.974025974026, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI1787251, Length=378, Percent_Identity=22.4867724867725, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87082237, Length=453, Percent_Identity=24.7240618101545, Blast_Score=70, Evalue=5e-13, Organism=Caenorhabditis elegans, GI115533094, Length=428, Percent_Identity=29.2056074766355, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI32566512, Length=374, Percent_Identity=22.9946524064171, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI115533096, Length=317, Percent_Identity=29.3375394321767, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI28573698, Length=549, Percent_Identity=26.775956284153, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI24651739, Length=427, Percent_Identity=28.5714285714286, Blast_Score=176, Evalue=5e-44, Organism=Drosophila melanogaster, GI24645928, Length=558, Percent_Identity=26.5232974910394, Blast_Score=166, Evalue=5e-41, Organism=Drosophila melanogaster, GI28574994, Length=474, Percent_Identity=28.0590717299578, Blast_Score=161, Evalue=9e-40, Organism=Drosophila melanogaster, GI24651741, Length=427, Percent_Identity=26.6978922716628, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24641117, Length=453, Percent_Identity=29.1390728476821, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI221459588, Length=479, Percent_Identity=29.4363256784969, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI281362918, Length=417, Percent_Identity=27.5779376498801, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24650192, Length=472, Percent_Identity=27.3305084745763, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI221459586, Length=478, Percent_Identity=29.2887029288703, Blast_Score=143, Evalue=4e-34, Organism=Drosophila melanogaster, GI281364280, Length=423, Percent_Identity=27.6595744680851, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI24640370, Length=527, Percent_Identity=24.6679316888046, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI221459582, Length=518, Percent_Identity=26.6409266409266, Blast_Score=139, Evalue=7e-33, Organism=Drosophila melanogaster, GI161076631, Length=430, Percent_Identity=26.5116279069767, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI221459584, Length=455, Percent_Identity=28.5714285714286, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI19920916, Length=542, Percent_Identity=25.6457564575646, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI221379702, Length=433, Percent_Identity=25.8660508083141, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI281362054, Length=434, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI281362052, Length=434, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI281362050, Length=434, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI24648056, Length=434, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI21356827, Length=434, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 58992; Mature: 58992
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSIDVCIIIGYLLLMLVIGYYSGKDNKNQEDYFLAGRSMPWIPIALSVAATMISANGF CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC IGGPGWAYVDGMYPVMVNITVPLAIFFALSITTPVIYKLKITSIYEYMGLRLGNYSRGLT CCCCCCEECCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCCCCHHH IIQFFINSLIQVSSMVYIPVLIIQMITGWSLYALVPIVVLVSIIYTLLGGIKAVIWTDSI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH QMIVVISAVFIVIIVALKGMNLSFFDTLQIAQQSGKLNTFDFSRDISVTNTFWATLIGGT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHH VMWIRYFCFDQSQVQRVLTSKSLKCAKNSFVVSAFVMNLVYYFMLLVGVILFVFYGGRSF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ETSNEIMITFILNELPVGAIGIIIAGVFAAAMSSIDSILNSMTTVFTKDIYEFYFKKDNK CCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ESSLKVTMIITVVIGVVMTGFIIMGFGGSIKSILDLVGNYISYFAGPATGAFVLAMFTYK CCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEE ANDKGVSIGFIVGLVLGFFISNKYNVSWLWNPAIGATITLIFGYIFSVILKKNHNVDDIK CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHH KYTAFGMRNHLISQGMDKVDGVSIVPFSLGKQELIVLAFFIIQYIILFLIQF HHHHHHHHHHHHHCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MISSIDVCIIIGYLLLMLVIGYYSGKDNKNQEDYFLAGRSMPWIPIALSVAATMISANGF CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC IGGPGWAYVDGMYPVMVNITVPLAIFFALSITTPVIYKLKITSIYEYMGLRLGNYSRGLT CCCCCCEECCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCCCCHHH IIQFFINSLIQVSSMVYIPVLIIQMITGWSLYALVPIVVLVSIIYTLLGGIKAVIWTDSI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH QMIVVISAVFIVIIVALKGMNLSFFDTLQIAQQSGKLNTFDFSRDISVTNTFWATLIGGT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHH VMWIRYFCFDQSQVQRVLTSKSLKCAKNSFVVSAFVMNLVYYFMLLVGVILFVFYGGRSF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ETSNEIMITFILNELPVGAIGIIIAGVFAAAMSSIDSILNSMTTVFTKDIYEFYFKKDNK CCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ESSLKVTMIITVVIGVVMTGFIIMGFGGSIKSILDLVGNYISYFAGPATGAFVLAMFTYK CCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEE ANDKGVSIGFIVGLVLGFFISNKYNVSWLWNPAIGATITLIFGYIFSVILKKNHNVDDIK CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHH KYTAFGMRNHLISQGMDKVDGVSIVPFSLGKQELIVLAFFIIQYIILFLIQF HHHHHHHHHHHHHCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]