| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126698213
Identifier: 126698213
GI number: 126698213
Start: 758061
End: 758873
Strand: Direct
Name: 126698213
Synonym: CD0635
Alternate gene names: NA
Gene position: 758061-758873 (Clockwise)
Preceding gene: 126698212
Following gene: 126698214
Centisome position: 17.67
GC content: 32.6
Gene sequence:
>813_bases GTGAACACTATGGAAGAAAAATATATCTTATCTGACCGAGGGAAAGTATATTATTGGATAAAAGAAAGTAATAGTGTGTT TGCAAAGAACTTAATTTTTTTGCCAGGACTAACAGCAAATCATCATCTTTTTGATTTCCAAATACAGTACTTTTCAAAAA ATCATAATGTATTGGTATGGGACGCTCCTGCTCATGGAAAATCAAGACCTTACTTAGATTTCTCATATTCTAACTTGGTA GAAGAATTGAAAGTAATTTTAGATAAACAAAATATGAAAAAGGTTGTACTTATAGGGCAATCGGCAGGGGGATTTGTGGC ACAGTCCTTTATTGTAAAATATCCAAATATGGTAGAAGGATTAATGATGATTGGAACTTGTCCATATGGAACTGACTATT ATAGTAAGTCAGATATTTTCTGGTTAAAACAGACTGAATGGATGCTAAAGTTATTCCCAGATAAATTGTTGCGAAACATA ATATCTAAGATGTGTGGAGCTACGTCTGAAGGCAGAAGGAGTATGCTGAAAATGTTAGAAGGTTACGAAAAAAAAGAACT GTGTCATCTCATGTATCTGGGATTTGCTGGGTTCATACCAGAAATTCAAGACTTAAATATACATTGTCCAGTTTGTTTGG TGGTTGGAGATAAAGACAAGACGGGTAAAGTGAGAAAATATAATGAGCAGTGGCACAATAAGACTGGGTATCCATTGCAC ATTATAAAAAATGCTTCACATAATGTAAATGTCGATAAACCTAATGAACTAAATCAGATTATGGATATATTTATTAAGCA ATTAAATATATAA
Upstream 100 bases:
>100_bases TCTGTTTTATAACTGAAATTTTGATAACATTTGATATTTTGATTTGTCATTGGTCAACATAGTCGTTAGTGTAATAATTT AAAAAAGTAGAATTTGGAGA
Downstream 100 bases:
>100_bases AAACTACATACTCATTAGGTAAATTATGTAGTATATGTGTTTACAGATGGTTATAGAAATAAATATGTAATAAACTACTT AACACTTAAAAAGTGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Hydrolase Alpha/Beta Fold; Oxidoreductase; Arylesterase; Antibiotic Resistance Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Domain Containing Protein
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNTMEEKYILSDRGKVYYWIKESNSVFAKNLIFLPGLTANHHLFDFQIQYFSKNHNVLVWDAPAHGKSRPYLDFSYSNLV EELKVILDKQNMKKVVLIGQSAGGFVAQSFIVKYPNMVEGLMMIGTCPYGTDYYSKSDIFWLKQTEWMLKLFPDKLLRNI ISKMCGATSEGRRSMLKMLEGYEKKELCHLMYLGFAGFIPEIQDLNIHCPVCLVVGDKDKTGKVRKYNEQWHNKTGYPLH IIKNASHNVNVDKPNELNQIMDIFIKQLNI
Sequences:
>Translated_270_residues MNTMEEKYILSDRGKVYYWIKESNSVFAKNLIFLPGLTANHHLFDFQIQYFSKNHNVLVWDAPAHGKSRPYLDFSYSNLV EELKVILDKQNMKKVVLIGQSAGGFVAQSFIVKYPNMVEGLMMIGTCPYGTDYYSKSDIFWLKQTEWMLKLFPDKLLRNI ISKMCGATSEGRRSMLKMLEGYEKKELCHLMYLGFAGFIPEIQDLNIHCPVCLVVGDKDKTGKVRKYNEQWHNKTGYPLH IIKNASHNVNVDKPNELNQIMDIFIKQLNI >Mature_270_residues MNTMEEKYILSDRGKVYYWIKESNSVFAKNLIFLPGLTANHHLFDFQIQYFSKNHNVLVWDAPAHGKSRPYLDFSYSNLV EELKVILDKQNMKKVVLIGQSAGGFVAQSFIVKYPNMVEGLMMIGTCPYGTDYYSKSDIFWLKQTEWMLKLFPDKLLRNI ISKMCGATSEGRRSMLKMLEGYEKKELCHLMYLGFAGFIPEIQDLNIHCPVCLVVGDKDKTGKVRKYNEQWHNKTGYPLH IIKNASHNVNVDKPNELNQIMDIFIKQLNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31322; Mature: 31322
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTMEEKYILSDRGKVYYWIKESNSVFAKNLIFLPGLTANHHLFDFQIQYFSKNHNVLVW CCCCCCCEEECCCCCEEEEEECCCCEEECCEEECCCCCCCCEEEEEEEEEECCCCCEEEE DAPAHGKSRPYLDFSYSNLVEELKVILDKQNMKKVVLIGQSAGGFVAQSFIVKYPNMVEG CCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHH LMMIGTCPYGTDYYSKSDIFWLKQTEWMLKLFPDKLLRNIISKMCGATSEGRRSMLKMLE HHHEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC GYEKKELCHLMYLGFAGFIPEIQDLNIHCPVCLVVGDKDKTGKVRKYNEQWHNKTGYPLH CCCHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEECCCCCCCCCEECCHHHCCCCCCEEE IIKNASHNVNVDKPNELNQIMDIFIKQLNI EEECCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTMEEKYILSDRGKVYYWIKESNSVFAKNLIFLPGLTANHHLFDFQIQYFSKNHNVLVW CCCCCCCEEECCCCCEEEEEECCCCEEECCEEECCCCCCCCEEEEEEEEEECCCCCEEEE DAPAHGKSRPYLDFSYSNLVEELKVILDKQNMKKVVLIGQSAGGFVAQSFIVKYPNMVEG CCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHH LMMIGTCPYGTDYYSKSDIFWLKQTEWMLKLFPDKLLRNIISKMCGATSEGRRSMLKMLE HHHEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC GYEKKELCHLMYLGFAGFIPEIQDLNIHCPVCLVVGDKDKTGKVRKYNEQWHNKTGYPLH CCCHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEECCCCCCCCCEECCHHHCCCCCCEEE IIKNASHNVNVDKPNELNQIMDIFIKQLNI EEECCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA