Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126698212

Identifier: 126698212

GI number: 126698212

Start: 757585

End: 757953

Strand: Direct

Name: 126698212

Synonym: CD0634

Alternate gene names: NA

Gene position: 757585-757953 (Clockwise)

Preceding gene: 126698211

Following gene: 126698213

Centisome position: 17.66

GC content: 29.54

Gene sequence:

>369_bases
ATGGATGTATATAGTTTTTGGAATGACACTTTGGCACAAGATGCTGTTAAGATAAGAAAATATTTTCATGAAGATGCTTA
TATTAATTGGCATGATACAAATGAGCATTTTATTTTAGAAGAATTTATTATTGCAAATTGTGAGTATCCTGATAAATGGA
ATGGTAAAGTAGAAAAGGTGCTAGAATTTGGAAATTTAGTAATTACAGTGACACATGTTTATGCAATAAATAAACCACTA
TCATTTCATGTCGTTTCATTTATCAGCCTTAAAGATGATAAGATTATTTCTATTGATGAATATTGGGGAGAGGATGATGA
TGTGCCACAGTGGAGATTAGATAAACATATTGGAAAGCCAATAAAATAG

Upstream 100 bases:

>100_bases
TGAAGTGTAAAAAATAAGTTAGTGTTGATTTTAGTTGCTAGTGATATTGAATAGTTATACAATAGCCATATAAATTAGAA
TTTGTAGAGGAGAAATGTAA

Downstream 100 bases:

>100_bases
TGTTTGTTCTGTTTTATAACTGAAATTTTGATAACATTTGATATTTTGATTTGTCATTGGTCAACATAGTCGTTAGTGTA
ATAATTTAAAAAAGTAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MDVYSFWNDTLAQDAVKIRKYFHEDAYINWHDTNEHFILEEFIIANCEYPDKWNGKVEKVLEFGNLVITVTHVYAINKPL
SFHVVSFISLKDDKIISIDEYWGEDDDVPQWRLDKHIGKPIK

Sequences:

>Translated_122_residues
MDVYSFWNDTLAQDAVKIRKYFHEDAYINWHDTNEHFILEEFIIANCEYPDKWNGKVEKVLEFGNLVITVTHVYAINKPL
SFHVVSFISLKDDKIISIDEYWGEDDDVPQWRLDKHIGKPIK
>Mature_122_residues
MDVYSFWNDTLAQDAVKIRKYFHEDAYINWHDTNEHFILEEFIIANCEYPDKWNGKVEKVLEFGNLVITVTHVYAINKPL
SFHVVSFISLKDDKIISIDEYWGEDDDVPQWRLDKHIGKPIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14517; Mature: 14517

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVYSFWNDTLAQDAVKIRKYFHEDAYINWHDTNEHFILEEFIIANCEYPDKWNGKVEKV
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHCCCCCCCCCCHHHHH
LEFGNLVITVTHVYAINKPLSFHVVSFISLKDDKIISIDEYWGEDDDVPQWRLDKHIGKP
HHHCCEEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEHHHCCCCCCCCCCHHHHHCCCC
IK
CC
>Mature Secondary Structure
MDVYSFWNDTLAQDAVKIRKYFHEDAYINWHDTNEHFILEEFIIANCEYPDKWNGKVEKV
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHCCCCCCCCCCHHHHH
LEFGNLVITVTHVYAINKPLSFHVVSFISLKDDKIISIDEYWGEDDDVPQWRLDKHIGKP
HHHCCEEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEHHHCCCCCCCCCCHHHHHCCCC
IK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA