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The map label for this gene is 126698214

Identifier: 126698214

GI number: 126698214

Start: 759258

End: 760148

Strand: Direct

Name: 126698214

Synonym: CD0636

Alternate gene names: NA

Gene position: 759258-760148 (Clockwise)

Preceding gene: 126698213

Following gene: 126698215

Centisome position: 17.7

GC content: 29.85

Gene sequence:

>891_bases
ATGATTGAGAGTATACCAGCAAAACAAATTTTACAAAAAGTGAAATTTGACAATACAAGATGGTTTGGAATTGACTATAA
TATGAATCTCTATCGTGGTTGTTCTCATGGATGTATATATTGTGATAGCCGTAGCACAATATACAACATAGAGAATTTTG
ACAAAGTTAGATATAAAGAAAATGTGATAGAAATTTTAAGTAAAGAATTGCGTTCAAAAAGAAAAAAAGGTGTAGTAGGC
ATTGGAGCTATGTCTGACACATATAATCCTTTTGAAAAGCAACTTTGTATTACAAAGCAAGCACTAGATTTGATTTCGGA
AAATCATTTTGGAGTGTCTATTGATACTAAAAGTAGTTTGGTGGTTAGAGATATACCGATTTTGCAGAAAATTAAAAAAA
ATAATTCTGCTATTGTAAAGTTGACTATAACCACTGCAAATGATGAATTATCAAAGAAAATAGAACCTTATGTAAATCCA
AGTTCTGTACGATTTGAGGCAGTGAAAGAACTTAATGATTCTGGAATTTTTTGTGGTATATTATTGACTCCTATGCTTCC
ATTTTTGACTGATACTAAAGATGAAATACGAGCAATTGTAGAAAAAGCACACAAGGCTAATGCAAAATTTATTTATTGTA
TGTATGGTGTAACAATGCGTAGTGGTCAGCGAGAGTTTTTTTATGAGCATTTAAGAGATATATCACCAAAATTGGTATTT
AAATATCAGAAAACATATGGTTTAAACTATGTATGTACTGTACAAAATAAAGATTGTTGTGAGAAGTTGTTAAGAGAAGA
ATGTGCACGTTATGGTATTTTGACGGATATGAAAGATATTATAAAAGCGTACAAGAGGTCGGAGTCATATACTCAAATAA
AATTTTTTTAA

Upstream 100 bases:

>100_bases
TACTATCGGATAGGTCTCTGCATATTTAAACCTTAGTAAAGGTAGTTAAAGTAGTAGTTTAAAAACTAAAAAATTATATA
AAGGAATTAGGTATAAGAAA

Downstream 100 bases:

>100_bases
GATAGGCTTTGGATGAGATATAATAGTGGTGATTGATGTGTTGATATTATAGTTGATTGTTAGAGAGGATATTATAGATG
AATATTAGTATTAATATTTT

Product: radical SAM superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MIESIPAKQILQKVKFDNTRWFGIDYNMNLYRGCSHGCIYCDSRSTIYNIENFDKVRYKENVIEILSKELRSKRKKGVVG
IGAMSDTYNPFEKQLCITKQALDLISENHFGVSIDTKSSLVVRDIPILQKIKKNNSAIVKLTITTANDELSKKIEPYVNP
SSVRFEAVKELNDSGIFCGILLTPMLPFLTDTKDEIRAIVEKAHKANAKFIYCMYGVTMRSGQREFFYEHLRDISPKLVF
KYQKTYGLNYVCTVQNKDCCEKLLREECARYGILTDMKDIIKAYKRSESYTQIKFF

Sequences:

>Translated_296_residues
MIESIPAKQILQKVKFDNTRWFGIDYNMNLYRGCSHGCIYCDSRSTIYNIENFDKVRYKENVIEILSKELRSKRKKGVVG
IGAMSDTYNPFEKQLCITKQALDLISENHFGVSIDTKSSLVVRDIPILQKIKKNNSAIVKLTITTANDELSKKIEPYVNP
SSVRFEAVKELNDSGIFCGILLTPMLPFLTDTKDEIRAIVEKAHKANAKFIYCMYGVTMRSGQREFFYEHLRDISPKLVF
KYQKTYGLNYVCTVQNKDCCEKLLREECARYGILTDMKDIIKAYKRSESYTQIKFF
>Mature_296_residues
MIESIPAKQILQKVKFDNTRWFGIDYNMNLYRGCSHGCIYCDSRSTIYNIENFDKVRYKENVIEILSKELRSKRKKGVVG
IGAMSDTYNPFEKQLCITKQALDLISENHFGVSIDTKSSLVVRDIPILQKIKKNNSAIVKLTITTANDELSKKIEPYVNP
SSVRFEAVKELNDSGIFCGILLTPMLPFLTDTKDEIRAIVEKAHKANAKFIYCMYGVTMRSGQREFFYEHLRDISPKLVF
KYQKTYGLNYVCTVQNKDCCEKLLREECARYGILTDMKDIIKAYKRSESYTQIKFF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34279; Mature: 34279

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIESIPAKQILQKVKFDNTRWFGIDYNMNLYRGCSHGCIYCDSRSTIYNIENFDKVRYKE
CCCCCCHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCEEEECCCCEEEECCCHHHHHHHH
NVIEILSKELRSKRKKGVVGIGAMSDTYNPFEKQLCITKQALDLISENHFGVSIDTKSSL
HHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
VVRDIPILQKIKKNNSAIVKLTITTANDELSKKIEPYVNPSSVRFEAVKELNDSGIFCGI
EEECCHHHHHHHCCCCEEEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEHHH
LLTPMLPFLTDTKDEIRAIVEKAHKANAKFIYCMYGVTMRSGQREFFYEHLRDISPKLVF
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCHHCCCCHHHHHHHHHCCCCHHEE
KYQKTYGLNYVCTVQNKDCCEKLLREECARYGILTDMKDIIKAYKRSESYTQIKFF
EEHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MIESIPAKQILQKVKFDNTRWFGIDYNMNLYRGCSHGCIYCDSRSTIYNIENFDKVRYKE
CCCCCCHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCEEEECCCCEEEECCCHHHHHHHH
NVIEILSKELRSKRKKGVVGIGAMSDTYNPFEKQLCITKQALDLISENHFGVSIDTKSSL
HHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
VVRDIPILQKIKKNNSAIVKLTITTANDELSKKIEPYVNPSSVRFEAVKELNDSGIFCGI
EEECCHHHHHHHCCCCEEEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEHHH
LLTPMLPFLTDTKDEIRAIVEKAHKANAKFIYCMYGVTMRSGQREFFYEHLRDISPKLVF
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCHHCCCCHHHHHHHHHCCCCHHEE
KYQKTYGLNYVCTVQNKDCCEKLLREECARYGILTDMKDIIKAYKRSESYTQIKFF
EEHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]