Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698206

Identifier: 126698206

GI number: 126698206

Start: 751541

End: 752122

Strand: Direct

Name: 126698206

Synonym: CD0628

Alternate gene names: NA

Gene position: 751541-752122 (Clockwise)

Preceding gene: 126698205

Following gene: 126698209

Centisome position: 17.52

GC content: 30.76

Gene sequence:

>582_bases
ATGAATAATAAAAAACATTGGTATGACTATTTATGGATTTTTTCTTCAATATATTTGATATTGGGATTTGTAAATATTAT
TTTCGCTTGGATTGGGCTAATTTGTTTCTTTGTTCCACTAGCTATTTCTATTGTTAAGGGAAATAAAGCTTACTGTAATA
AGTATTGTGGAAGAGGGCAACTGTTTAATTTGCTTGGAAATAAATTGAAGCTGTCAAGAAATAGAGATATTCCTAAATTT
ATTAGAAGTAAGTGGTTTAGATATGGGTTTTTGACATTTTTTATGGTAATGTTTGCTAATATGCTTTTTTCAACTTATTT
AGTGTTTGAAGGAAGTAGAAATTTTAAAGAAGTAGTGACTTTGTTGTGGACTATAAAAATGCCTTGGCAATGGGCGTATC
ATGGAACTTTAGTTTCACCTTGGGTGGTACAGTTTGCATTTGGTTTTTATAGTGTTATGCTTACATCAACTGTTCTTGGT
TTGATTACTATGATATTGTTTAAACCTCGTTCATGGTGTGTTTATTGCCCTATGGGTACTATGACTCAGATGATATGTAA
GGCAAAGAGTAAGTCTATATAG

Upstream 100 bases:

>100_bases
AATAGAGATTTATGTGTTGGATGTGGGATTTGTGAAAAGATATGTCCAGCATCTGTAATTGAGATTATAACAATATTAAA
AGAGGAAGAAGGTAAGTGTC

Downstream 100 bases:

>100_bases
AAAGGCTTTATGTGATATTTACAGTTTTGTTAGAGATGAGTAGTAGGTTTGAATATATATGACAAATATATGAGTATAGG
GGCATAGATTTAGTTTGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQLFNLLGNKLKLSRNRDIPKF
IRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVTLLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLG
LITMILFKPRSWCVYCPMGTMTQMICKAKSKSI

Sequences:

>Translated_193_residues
MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQLFNLLGNKLKLSRNRDIPKF
IRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVTLLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLG
LITMILFKPRSWCVYCPMGTMTQMICKAKSKSI
>Mature_193_residues
MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQLFNLLGNKLKLSRNRDIPKF
IRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVTLLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLG
LITMILFKPRSWCVYCPMGTMTQMICKAKSKSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22756; Mature: 22756

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH
LFNLLGNKLKLSRNRDIPKFIRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVT
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLGLITMILFKPRSWCVYCPMGT
HHHHHCCCCEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHH
MTQMICKAKSKSI
HHHHHHHHHCCCC
>Mature Secondary Structure
MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH
LFNLLGNKLKLSRNRDIPKFIRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVT
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLGLITMILFKPRSWCVYCPMGT
HHHHHCCCCEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHH
MTQMICKAKSKSI
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA