Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698209

Identifier: 126698209

GI number: 126698209

Start: 755054

End: 755575

Strand: Direct

Name: 126698209

Synonym: CD0631

Alternate gene names: NA

Gene position: 755054-755575 (Clockwise)

Preceding gene: 126698206

Following gene: 126698210

Centisome position: 17.6

GC content: 30.08

Gene sequence:

>522_bases
ATGGCTACAATAGATTTAATTGTATTGGGAATAGTAAAGCAACAACCCAAGAGTGCTTATGATATTCAAAAGGCAGTGGA
ATACAGGAATATATCACGTTGGGTTAAAATAAGTACACCATCAATTTATAAAAAAGTAATTCAATTAGAACAAAAGGGAT
ATATTGAAAGTAAAACTGTGAAGAATGGAAAAATGCCAGAAAAAGCAGTTTATTCATTAACTGAATTAGGTGAGACACAT
TTTTTAGATTTAATGTTTGATACATCTAGCAAACCAATAAATATTCTTTTAGATTTTAATGCTGTTATAGTAAATTTAAA
TAGCCTTACACCAGAAAAACAGAAATTATGTCTCAATAATATTGAAGAGAATGTTCAAGAGTTAAAGAAAACTATTGAGG
AAAATATAAGTATAAAGACAGAAGTACCAGAGACAGCAAAAGCAGTGTTGGAGCAACAGTTGGTGCTAGCACAAGCATTG
GAAACCTGGATAAATTCTTTAAAAGATAATACGGGGAATTAG

Upstream 100 bases:

>100_bases
AAGTCTAAATTATAATACTATAAATTATAGTAAGTATGGAAAATAGTACTATAATTTATAGTATTTGTCAATAGTAAGAA
AACTAAAGGAGATGATTTTT

Downstream 100 bases:

>100_bases
AATTAGAGAAGCTAACTTAATAATCATTAAACAAAAACCAGCATATTTAATAATGAGATATTAGAAAAAATAAAACAAAT
GATATAAACTGAAAAGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: HTH Containing Transcriptional Regulator

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MATIDLIVLGIVKQQPKSAYDIQKAVEYRNISRWVKISTPSIYKKVIQLEQKGYIESKTVKNGKMPEKAVYSLTELGETH
FLDLMFDTSSKPINILLDFNAVIVNLNSLTPEKQKLCLNNIEENVQELKKTIEENISIKTEVPETAKAVLEQQLVLAQAL
ETWINSLKDNTGN

Sequences:

>Translated_173_residues
MATIDLIVLGIVKQQPKSAYDIQKAVEYRNISRWVKISTPSIYKKVIQLEQKGYIESKTVKNGKMPEKAVYSLTELGETH
FLDLMFDTSSKPINILLDFNAVIVNLNSLTPEKQKLCLNNIEENVQELKKTIEENISIKTEVPETAKAVLEQQLVLAQAL
ETWINSLKDNTGN
>Mature_172_residues
ATIDLIVLGIVKQQPKSAYDIQKAVEYRNISRWVKISTPSIYKKVIQLEQKGYIESKTVKNGKMPEKAVYSLTELGETHF
LDLMFDTSSKPINILLDFNAVIVNLNSLTPEKQKLCLNNIEENVQELKKTIEENISIKTEVPETAKAVLEQQLVLAQALE
TWINSLKDNTGN

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19592; Mature: 19461

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIDLIVLGIVKQQPKSAYDIQKAVEYRNISRWVKISTPSIYKKVIQLEQKGYIESKTV
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCCCCC
KNGKMPEKAVYSLTELGETHFLDLMFDTSSKPINILLDFNAVIVNLNSLTPEKQKLCLNN
CCCCCCHHHHHHHHHCCCHHEEEEEECCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHH
IEENVQELKKTIEENISIKTEVPETAKAVLEQQLVLAQALETWINSLKDNTGN
HHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATIDLIVLGIVKQQPKSAYDIQKAVEYRNISRWVKISTPSIYKKVIQLEQKGYIESKTV
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCCCCC
KNGKMPEKAVYSLTELGETHFLDLMFDTSSKPINILLDFNAVIVNLNSLTPEKQKLCLNN
CCCCCCHHHHHHHHHCCCHHEEEEEECCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHH
IEENVQELKKTIEENISIKTEVPETAKAVLEQQLVLAQALETWINSLKDNTGN
HHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA